PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA12G15340.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

Protein Properties

Length: 413aa MW: 44013.9 Da PI: 8.1305

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA12G15340.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	95.5	3.6e-30	97	188	1	87
EEEE-..-HHHHTT-EE--HHH.HTT....---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-.SS CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh....ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkld.gr 87 f+kv tpsdv+k++rlv+pk++ae++ +e++ l +ed+ g+ W+++++y+++s++yv+tkGW++Fvk+++L++gD+v F++ g+ ONIVA12G15340.1 97 FDKVVTPSDVGKLNRLVIPKQYAEKYfpldAAANEKGLLLNFEDRAGKPWRFRYSYWNSSQSYVMTKGWSRFVKEKRLDAGDTVSFSRGiGD 188 89*************************955556888**********************************************944243 PP

Sequence ? help Back to Top
Protein Sequence Length: 413 aa Download sequence
MEFTTSSRFS KEEEDEEQDE AGRREIPFMT ATAEAAPAPT SSSSSPAHHA ASASASASAS 60 GSSTPFRSDD GAGASGSGGG GGGGGGEAEV VEKEHMFDKV VTPSDVGKLN RLVIPKQYAE 120 KYFPLDAAAN EKGLLLNFED RAGKPWRFRY SYWNSSQSYV MTKGWSRFVK EKRLDAGDTV 180 SFSRGIGDEA ARHRLFIDWK RRADTRDPLR LPRGLPLPMP LTSHYAPWGI GGGGGFFVPP 240 SPPATLYEHR LRQGLDFRAF NPAAAMGRQV LLFGSARIPP QAPLLARAPS PLHHHYTLQP 300 SGDGVRAAGS PVVLDSVPVI ESPTTAAKRV RLFGVNLDNP HAGGGGPAAA GESSNHGNAL 360 SLQTPAWMRR DPTLRLLELP PHHHHGAESS AASSPSSSSS SKRDAHSALD LDL

Sequence ? help Back to Top

Protein Sequence Length: 413 aa Download sequence

MEFTTSSRFS KEEEDEEQDE AGRREIPFMT ATAEAAPAPT SSSSSPAHHA ASASASASAS  60
GSSTPFRSDD GAGASGSGGG GGGGGGEAEV VEKEHMFDKV VTPSDVGKLN RLVIPKQYAE  120
KYFPLDAAAN EKGLLLNFED RAGKPWRFRY SYWNSSQSYV MTKGWSRFVK EKRLDAGDTV  180
SFSRGIGDEA ARHRLFIDWK RRADTRDPLR LPRGLPLPMP LTSHYAPWGI GGGGGFFVPP  240
SPPATLYEHR LRQGLDFRAF NPAAAMGRQV LLFGSARIPP QAPLLARAPS PLHHHYTLQP  300
SGDGVRAAGS PVVLDSVPVI ESPTTAAKRV RLFGVNLDNP HAGGGGPAAA GESSNHGNAL  360
SLQTPAWMRR DPTLRLLELP PHHHHGAESS AASSPSSSSS SKRDAHSALD LDL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G01030.1	9e-66	B3 family protein

Link Out ? help Back to Top
Ensembl	ONIVA12G15340.1