PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA12G15590.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

C2H2

Protein Properties

Length: 127aa MW: 12573.1 Da PI: 6.2337

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA12G15590.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	12.2	0.00054	35	54	1	20
EEETTTTEEESSHHHHHHHH CS zf-C2H2 1 ykCpdCgksFsrksnLkrHi 20 ++C+ Cgk F++ L H ONIVA12G15590.1 35 HECNVCGKAFPTGQALGGHK 54 79*********988887665 PP

Sequence ? help Back to Top
Protein Sequence Length: 127 aa Download sequence
MVDDDEVVVE TKPAAIATPS SSASGVSGGG GGRAHECNVC GKAFPTGQAL GGHKRCHYDG 60 TIGSAAGAGA SKPAAKTTVA VAASRGFDLN LPALPDVAAA ADQRCAAEDD EVLSPLAFKK 120 PRLMIPA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G43170.1	5e-12	C2H2 family protein

Link Out ? help Back to Top
Ensembl	ONIVA12G15590.1