PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA12G17030.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family CPP
Protein Properties Length: 329aa    MW: 36011.7 Da    PI: 5.998
Description CPP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA12G17030.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCR44.23.9e-145390340
              TCR  3 kkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40
                     +k+C+CkkskClk+YC Cfa+g++Cse+C C+ C Nk+
  ONIVA12G17030.1 53 CKSCSCKKSKCLKLYCVCFASGSHCSESCGCDPCYNKS 90
                     89**********************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 329 aa     Download sequence    
MGETPAPALL APAENASAEA AFAVPPAAIA AVVEANGNSE KKKKRKTDEG EGCKSCSCKK  60
SKCLKLYCVC FASGSHCSES CGCDPCYNKS IHGVPRSTPA LPLKAVQTLE TGQDSVGGAG  120
CSINCKCDDC KNPYGRKVGV ILDGKNILAG PTPNERNGTE ADSSDDEEDD YYMNRPLSPV  180
SPSPVSRESS FQQETLVGVE VQTMNGHLYP KPLTQVRPES WQLTRRPTEE VRGEAWHYLR  240
RPSEDGTSDV MEGHADPKFQ RDNKQLENHV DRYSIPRCIE VMNAMADLSP IEKSLAPDVF  300
LDPSNREIFL SLTVDIRTMW LKRKMKSLV
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
14146KKKKRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G14770.15e-11CPP family protein