PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OUZ99166.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

LBD

Protein Properties

Length: 170aa MW: 18869.7 Da PI: 7.4226

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OUZ99166.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	139.3	1.3e-43	6	105	1	100
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallke 99 +Ca+Ck+lrr+Ca+dC++apyfp+++p+kfa+vhk+FGasn++k+l++lp ++r+da+sslv+eA+ar+rdPvyG+vg i+ lq+q+++l+ +la++++ OUZ99166.1 6 PCASCKLLRRRCAADCIFAPYFPSDDPHKFAVVHKVFGASNISKMLQELPIHQRSDAVSSLVFEANARVRDPVYGCVGAISYLQKQVSKLQMQLAMAQA 104 7**********************************************************************************************9998 PP DUF260 100 e 100 e OUZ99166.1 105 E 105 7 PP

Sequence ? help Back to Top
Protein Sequence Length: 170 aa Download sequence
MGGSSPCASC KLLRRRCAAD CIFAPYFPSD DPHKFAVVHK VFGASNISKM LQELPIHQRS 60 DAVSSLVFEA NARVRDPVYG CVGAISYLQK QVSKLQMQLA MAQAEILCLQ MQQAETELPS 120 LQYQIDPDEK SSILLHGSNL MINNLPQYLN FASSGSVIHQ DPLKRESLWT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G30130.1	9e-77	LBD family protein