PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OUZ99213.1
Organism
Macleaya cordata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
Family HB-PHD
Protein Properties Length: 776aa    MW: 88598.9 Da    PI: 9.8072
Description HB-PHD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OUZ99213.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox33.47.5e-11544589853
                 -HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHH CS
    Homeobox   8 tkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRa 53 
                  ++ +e L ++F++n  ps++ +e L+k+lg+  +++  WF+N R+
  OUZ99213.1 544 PPNAVEKLRRVFAENELPSRAVKENLSKQLGIASEKINKWFKNARY 589
                 57899****************************************8 PP
2PHD35.52.3e-12266321151
                 SBTTTSS..TCTTSSEEEBS.SSSSEEETTTSTSSSSHHSHHSS..TBSSHHHHTT CS
         PHD   1 rCkvCgk..sdeegelvlCd.gCkewfHlkClglkleseekpeg..ewlCeeCkek 51 
                 +C+ C++  +  +++++lCd +C+ +fH+kCl+++l +e++p g   w+C+ C++k
  OUZ99213.1 266 FCAKCKSreAFPDNDIILCDgTCNCAFHQKCLEPPLATENIPPGdqGWFCKFCECK 321
                 699****55455********56********************9999*******985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 776 aa     Download sequence    
MQNTEKKLHH QASGESCFSK KEIGSKINTT EKNVGERYYT KRYKPIQRSQ VKTIGSILSK  60
RRGSEFSSNG ARKNSLNGKQ IRRKIVQKVS DTNSSEKPLS SILQCGKFSL HGRDTNGDLG  120
TRKVDRRRKR KRRKENRVQD DKEKAKEDTD GDLGTRKVNR RRKRKRRKEN REQDEASRLQ  180
RRTRYLLIKM KLEQNLIDAY SSEGWKGQSR EKIKPVRELQ RAKKQILKCK LGIRDAIRQL  240
DLLGSEGCIE QSVLGPDGSV FHEHIFCAKC KSREAFPDND IILCDGTCNC AFHQKCLEPP  300
LATENIPPGD QGWFCKFCEC KMEILEAINA HIGTHFSANS NWQEIFEEAA MGPDGENASL  360
NPEDEWPSDE SDDDDYDPER NEMSCSFSRS GAEDNNPDEA SSSSSFFWTS DEEAILQSRR  420
LENDGSPTGG FYQGKERGHF VDLMDDINSD DTTDREMKTR RRQRRDVDYR KLHDEMFGKD  480
VLENEQVSED EDWGPGRRRR RLNETDAAGT LVALCGNGDG CSDVMPIKAK RSVSEDKRTL  540
FRIPPNAVEK LRRVFAENEL PSRAVKENLS KQLGIASEKI NKWFKNARYT ALKIRKADST  600
KQLPTTSMIA KESTAATGNN WTTDLMTSNG NSYAVPSDNE GVQTPISLGK IRRRRNTKSL  660
TISPKKKQHK RTARAQPTHK NEVSTLLSNT VSFKKKLKAA PKEDKIKPKY ELVTSKKTEQ  720
LYLAEMERLC HLEAKLAELK KVLLRICNDK NHVTDQINMD EPVIIYVPVA EVRVKG
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1126132RRRKRKR
2126134RRRKRKRRK
3126135RRRKRKRRKE
4127132RRKRKR
5127133RRRKRKR
6127136RRRKRKRRKE
7128133RKRKRR
8128134RRRKRKR
9128137RRRKRKRRKE
10129134KRKRRK
11130135RKRRKE
12159166NRRRKRKR
13160166RRRKRKR
14160168RRRKRKRRK
15160169RRRKRKRRKE
16161166RRKRKR
17161191RRKRKRRKENREQDEASRLQRRTRYLLIKMK
18161167RRRKRKR
19161170RRRKRKRRKE
20162167RKRKRR
21162192RRKRKRRKENREQDEASRLQRRTRYLLIKMK
22162168RRRKRKR
23162171RRRKRKRRKE
24163168KRKRRK
25163193RRKRKRRKENREQDEASRLQRRTRYLLIKMK
26164169RKRRKE
27164194RRKRKRRKENREQDEASRLQRRTRYLLIKMK
28165195RRKRKRRKENREQDEASRLQRRTRYLLIKMK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G29940.11e-147HB-PHD family protein