PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OUZ99599.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

HD-ZIP

Protein Properties

Length: 339aa MW: 38338.2 Da PI: 4.5633

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OUZ99599.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	59	7.6e-19	61	114	3	56
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 k+++++ +q+++Le+ Fe ++++ e++ +LA++lgL+ rqV vWFqNrRa++k OUZ99599.1 61 KKRRLSVDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWK 114 566899***********************************************9 PP
2	HD-ZIP_I/II	127	8e-41	60	152	1	93
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 ekkrrls +qvk+LE++Fe e+kLeperKv+la+eLglqprqvavWFqnrRAR+ktkqlE+dy Lk+ yd lk + e+L++++e+L +elke OUZ99599.1 60 EKKRRLSVDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQLERDYGILKSDYDDLKLKFEALQQNKEALLAELKE 152 69***************************************************************************************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 339 aa Download sequence
MKRLGSSDSL GALISICPST DEKSSGGNNN NNTVYSRGFQ SMLEGLDEED CLEESGHITE 60 KKRRLSVDQV KALEKNFEVE NKLEPERKVK LAQELGLQPR QVAVWFQNRR ARWKTKQLER 120 DYGILKSDYD DLKLKFEALQ QNKEALLAEL KELKSKLQED NTESNLSVKE EILKSEPENR 180 DILEQSKISL NEQTTQDYFD NSNNGVGSVL VFGDFKDGSS DSDSSAILNE DINNNNYSPS 240 KAISSSGVLH QQPQLLISSP ASSSVRFNNL SSSSSPSSIN CFQFSDSRAV SSNTQRVYNQ 300 NQPFVKMEEH NFFGAEEPCN FFSDEQPPTL QWYCQDPWN

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	61	90	KKRRLSVDQVKALEKNFEVENKLEPERKVK
2	109	117	RRARWKTKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G22430.1	3e-53	HD-ZIP family protein