PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OUZ99872.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

MYB

Protein Properties

Length: 240aa MW: 27851.6 Da PI: 8.611

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OUZ99872.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	48.4	2.2e-15	12	59	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+W +eEd+ll ++++ +G g W+t++++ g+ R +k+c++rw +yl OUZ99872.1 12 KGPWKPEEDLLLTRYIETHGEGKWATVSKRSGLMRGGKSCRLRWKNYL 59 79********************************************97 PP
2	Myb_DNA-binding	53.2	6.9e-17	65	110	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg +++eE++l+++ +k+lG++ W++Ia +++ gRt++++k++w+++l OUZ99872.1 65 RGGMSEEEEDLIIRMHKLLGNR-WSLIAGRLP-GRTDNEVKNYWNTHL 110 6779****************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 240 aa Download sequence
MEREGNKQEL KKGPWKPEED LLLTRYIETH GEGKWATVSK RSGLMRGGKS CRLRWKNYLR 60 PNLKRGGMSE EEEDLIIRMH KLLGNRWSLI AGRLPGRTDN EVKNYWNTHL TKRQPQQKPE 120 GPKLKRRKLS HLTDAQPIYH QSPNKTDELD EGNDIQTTIK GAEEGSNAMT AVSHSWMDVI 180 KSSNNEIQSQ WLPMDVKFYE EPYLPFLDSR FCIESFGVGA ENYWTGSLSY ILDDLYPVLL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G52600.1	3e-63	MYB family protein