PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OVA00155.1
Organism
Macleaya cordata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
Family M-type_MADS
Protein Properties Length: 71aa    MW: 8193.4 Da    PI: 9.4252
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OVA00155.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF97.46.1e-311463251
                ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
      SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                 ien ++rqvtfskRrng+lKKA+ELSvLCdaeva+i+fs++ klye+ss
  OVA00155.1 14 MIENATRRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPREKLYEFSS 63
                69**********************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 71 aa     Download sequence    
MINNSNGEQS QMRMIENATR RQVTFSKRRN GLLKKAFELS VLCDAEVALI VFSPREKLYE  60
FSSSRIDFTS C
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G22950.12e-30MIKC_MADS family protein