PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA00347.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

NAC

Protein Properties

Length: 372aa MW: 40872.2 Da PI: 7.5678

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA00347.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	179.4	9.2e-56	15	143	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kge 98 lppGfrFhPtdeel+++yL kkv ++++++ ++i+evd++k+ePwdLp k+k +ekewyf+s rd+ky+tg r+nrat sgyWkatgkd+e++s+ ++ OVA00347.1 15 LPPGFRFHPTDEELITYYLIKKVFDSNFTV-RAIAEVDLNKCEPWDLPGKAKMGEKEWYFYSLRDRKYPTGLRTNRATGSGYWKATGKDREIYSSkTSC 112 79************************99.89***********99999************************************975566 PP NAM 99 lvglkktLvfykgrapkgektdWvmheyrle 129 lvg+kktLvfykgrapkgek++Wvmheyrle OVA00347.1 113 LVGMKKTLVFYKGRAPKGEKSNWVMHEYRLE 143 7**************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 372 aa Download sequence
MENLFHLSNN NETHLPPGFR FHPTDEELIT YYLIKKVFDS NFTVRAIAEV DLNKCEPWDL 60 PGKAKMGEKE WYFYSLRDRK YPTGLRTNRA TGSGYWKATG KDREIYSSKT SCLVGMKKTL 120 VFYKGRAPKG EKSNWVMHEY RLEGKLSYHY LSSSSKDEWV ISRVFQKSGG TGVTGTVSGG 180 NGGGGACAGG GGKKNRQGSG GFYPDNVGSP SSSTLPPLLD SSPYVANSST DRDSCSYENE 240 SAREQHVPCF STVAATAAAN TFNQNHSSGF IGSSTSLINH NSTVDPSGQF GWSGGVSAFQ 300 SLRSLQEMKF HHMPFFYSAL APMPGPQDQT NNEIGGCSSA GRNWVEAESE HQTVDKSRME 360 VGATEFDCLW SY

Sequence ? help Back to Top

Protein Sequence Length: 372 aa Download sequence

MENLFHLSNN NETHLPPGFR FHPTDEELIT YYLIKKVFDS NFTVRAIAEV DLNKCEPWDL  60
PGKAKMGEKE WYFYSLRDRK YPTGLRTNRA TGSGYWKATG KDREIYSSKT SCLVGMKKTL  120
VFYKGRAPKG EKSNWVMHEY RLEGKLSYHY LSSSSKDEWV ISRVFQKSGG TGVTGTVSGG  180
NGGGGACAGG GGKKNRQGSG GFYPDNVGSP SSSTLPPLLD SSPYVANSST DRDSCSYENE  240
SAREQHVPCF STVAATAAAN TFNQNHSSGF IGSSTSLINH NSTVDPSGQF GWSGGVSAFQ  300
SLRSLQEMKF HHMPFFYSAL APMPGPQDQT NNEIGGCSSA GRNWVEAESE HQTVDKSRME  360
VGATEFDCLW SY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G53950.1	2e-90	NAC family protein