PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA00369.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

SBP

Protein Properties

Length: 188aa MW: 20910.3 Da PI: 10.0781

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA00369.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	134.6	3.2e-42	64	141	1	78
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 +Cq+e+C +dlseak+yhrrhkvCe+hskapvv+v+gl+qrfCqqCsrfhelsefDe+krsCrrrLa+hnerrrk+++ OVA00369.1 64 CCQAEKCMVDLSEAKRYHRRHKVCEHHSKAPVVMVAGLRQRFCQQCSRFHELSEFDEAKRSCRRRLAGHNERRRKSSS 141 6**************************************************************************976 PP

Sequence ? help Back to Top
Protein Sequence Length: 188 aa Download sequence
MEAKSRPEGG KRSLKEKAKK EEDAEEEEGF GSDDDKRKKG PFSKKGSNGG GGGSSGGGGV 60 AQPCCQAEKC MVDLSEAKRY HRRHKVCEHH SKAPVVMVAG LRQRFCQQCS RFHELSEFDE 120 AKRSCRRRLA GHNERRRKSS SESHGEGSGR KGGSPQLKEN HCRQADQTGR LPITTLPENS 180 SYKHFQIR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G15270.1	2e-35	SBP family protein