PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OVA00925.1
Organism
Macleaya cordata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
Family SBP
Protein Properties Length: 204aa    MW: 23114.4 Da    PI: 8.0699
Description SBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OVA00925.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SBP72.76.3e-23157204148
                 --SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSS CS
         SBP   1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsr 48 
                 +Cq+egC  dl++ak+yhrrhkvCe+hska++v++ gleqrfCqqCsr
  OVA00925.1 157 RCQAEGCMIDLTNAKHYHRRHKVCEFHSKATKVVAGGLEQRFCQQCSR 204
                 6**********************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 204 aa     Download sequence    
MMNNITSDGG ICSNNNSNPS MVSFVGLECN NQKQYGDWET STHTPTTTNN NNNNASNPNF  60
INPTTNIFDH NFNYPHSSSS STFASNFNPF SQFPDYPSSN FFKKQEGLDG GLYYNSTDRG  120
IGLNLGHRTY FSSTESTMMD RLIRRPRGFY LENQVPRCQA EGCMIDLTNA KHYHRRHKVC  180
EFHSKATKVV AGGLEQRFCQ QCSR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G02065.24e-35SBP family protein