PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OVA00945.1
Organism
Macleaya cordata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
Family BBR-BPC
Protein Properties Length: 143aa    MW: 16437.6 Da    PI: 9.5709
Description BBR-BPC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OVA00945.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GAGA_bind131.71.6e-402143109253
   GAGA_bind 109 dslqqlse.pqledsavelreeeklealpieeaaeeakekkkkkkrqrakkpkekkakkkkkksekskkkvkkesad..erskaekksidlvlngvslD 204
                 ++ q++++ p++++  ++ re++++ea pi+   +++    k+   +r +++ke+ka + +k+  ++ +kv k +++  +r   +++  dl+ln+v +D
  OVA00945.1   2 HHQQHMHHsPHMAEAYYNSREMHTNEAIPISVVSSVSP---KP---RRDRQTKEHKAISSNKRALNPSRKVGKRGCNdlNRCSDPWRGHDLGLNHVYFD 94 
                 444444444********************987443333...22...34566777777777777778888888888776788999*************** PP

   GAGA_bind 205 estlPvPvCsCtGalrqCYkWGnGGWqSaCCtttiSvyPLPvstkrrga 253
                 +s++ v vC+CtG+l+qCYkWG  GWqSaCCt t+S+yPL v++++r++
  OVA00945.1  95 DSNMSVHVCTCTGVLQQCYKWGKWGWQSACCTSTLSMYPLLVVPNKRHS 143
                 ***********************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 143 aa     Download sequence    
MHHQQHMHHS PHMAEAYYNS REMHTNEAIP ISVVSSVSPK PRRDRQTKEH KAISSNKRAL  60
NPSRKVGKRG CNDLNRCSDP WRGHDLGLNH VYFDDSNMSV HVCTCTGVLQ QCYKWGKWGW  120
QSACCTSTLS MYPLLVVPNK RHS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G42520.32e-32BBR-BPC family protein