PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA01002.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

MYB

Protein Properties

Length: 288aa MW: 33220.8 Da PI: 9.6257

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA01002.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	55.3	1.6e-17	31	77	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+W + Ed+llv +v+q+G + W+ Ia +++ gR +kqc++rw+++l OVA01002.1 31 KGSWRPYEDQLLVSLVQQHGEKKWSYIATMLN-GRIGKQCRERWYNHL 77 799***************************.***********97 PP
2	Myb_DNA-binding	52.6	1e-16	83	125	1	45
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 + +WT++E+ lv+a+ G++ W+ Ia++++ gRt++++k++w+ OVA01002.1 83 KEAWTQDEEVALVKAHSTIGNR-WAEIAKRIP-GRTENSIKNHWN 125 579*****************.*****.*********8 PP

Sequence ? help Back to Top
Protein Sequence Length: 288 aa Download sequence
MEMFRKDFSS LLKDPYFPVD ETPESERVVT KGSWRPYEDQ LLVSLVQQHG EKKWSYIATM 60 LNGRIGKQCR ERWYNHLRPD IKKEAWTQDE EVALVKAHST IGNRWAEIAK RIPGRTENSI 120 KNHWNATWRR LHSKSKCRKP SYSRGNGKPT SILQEYIRSL GLVVEKGIEK PKRKVKKAYT 180 PNTSLKDKAE QGQVSKEIYI PNAPIPPSPV NMDMTNGEMR INITDEQNQV MFDDMDISSF 240 FSSPPSSSYA FGTSLEDPMV GFPDGLYKMK NELDLVEMVA KSVNINNW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G27785.1	5e-55	MYB family protein