PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA01081.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

C2H2

Protein Properties

Length: 635aa MW: 68142 Da PI: 8.5632

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA01081.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	16	3.3e-05	79	101	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C+ C+k F r nL+ H r H OVA01081.1 79 FICEVCNKGFQREQNLQLHRRGH 101 89*******************88 PP
2	zf-C2H2	12.4	0.00049	155	177	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC +C+k++ +s+ k H +t+ OVA01081.1 155 WKCDKCSKRYAVQSDWKAHSKTC 177 58*****************9998 PP

Sequence ? help Back to Top
Protein Sequence Length: 635 aa Download sequence
MAAASSSSQF FGIREEDQNN QMKQQQSSTP TSSTAPTTTA PQKKKRNLPG TPSNDGIEMD 60 PDAEVIALSP KTLMATNRFI CEVCNKGFQR EQNLQLHRRG HNLPWKLKQK TTKEVKRRVY 120 LCPEPTCVHH DPSRALGDLT GIKKHFCRKH GEKKWKCDKC SKRYAVQSDW KAHSKTCGTR 180 EYRCDCGTLF SRRDSFITHR AFCDALAQES ARLPTGLSNM GSHLYGSNSN MGLGLSQVGS 240 QISSLQDQNQ PSSDLLRLGG AGGTQFDHLM PPSAPSPFRP SQTAPSSGFF LPNSNQDYHD 300 HQEPQSHHGL LQNKPFHGLM QLPELQTPTA NTSSTAAAAA AANLFNLSFF SNSSTTSSNA 360 NNNSSHISNS NLLLQDQFNS GNPGGHDQGT TLFSGNIMGD HHNMGSNVSS LYNASVQNDT 420 VIPQMSATAL LQKAAQMGST TSGNSALLRG FGSSSTSARS DRPHLSTNFR GSFGGNGGGG 480 GGGGESLRSQ IENENHLQDL MNSLANGTSS IFGSGSGGMN TFGGNCTSST VGHGQENTNF 540 GGFNTNRISL EQHHSNSNLS NMDDQAKLHQ NLTVSIGGSD RLTRDFLGVG GMVRSMGGIA 600 QRDQQQQHHG IDIGSLDSEM KSATANRSFG GGNLQ

Sequence ? help Back to Top

Protein Sequence Length: 635 aa Download sequence

MAAASSSSQF FGIREEDQNN QMKQQQSSTP TSSTAPTTTA PQKKKRNLPG TPSNDGIEMD  60
PDAEVIALSP KTLMATNRFI CEVCNKGFQR EQNLQLHRRG HNLPWKLKQK TTKEVKRRVY  120
LCPEPTCVHH DPSRALGDLT GIKKHFCRKH GEKKWKCDKC SKRYAVQSDW KAHSKTCGTR  180
EYRCDCGTLF SRRDSFITHR AFCDALAQES ARLPTGLSNM GSHLYGSNSN MGLGLSQVGS  240
QISSLQDQNQ PSSDLLRLGG AGGTQFDHLM PPSAPSPFRP SQTAPSSGFF LPNSNQDYHD  300
HQEPQSHHGL LQNKPFHGLM QLPELQTPTA NTSSTAAAAA AANLFNLSFF SNSSTTSSNA  360
NNNSSHISNS NLLLQDQFNS GNPGGHDQGT TLFSGNIMGD HHNMGSNVSS LYNASVQNDT  420
VIPQMSATAL LQKAAQMGST TSGNSALLRG FGSSSTSARS DRPHLSTNFR GSFGGNGGGG  480
GGGGESLRSQ IENENHLQDL MNSLANGTSS IFGSGSGGMN TFGGNCTSST VGHGQENTNF  540
GGFNTNRISL EQHHSNSNLS NMDDQAKLHQ NLTVSIGGSD RLTRDFLGVG GMVRSMGGIA  600
QRDQQQQHHG IDIGSLDSEM KSATANRSFG GGNLQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G02070.1	1e-112	C2H2 family protein