PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA01126.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

NF-X1

Protein Properties

Length: 1115aa MW: 120952 Da PI: 8.1353

Description

NF-X1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA01126.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-NF-X1	20.9	8.1e-07	365	382	1	18
zf-NF-X1 1 CGkHkCqklCHeGpCppC 18 CG+H+C+++CH+G C++C OVA01126.1 365 CGNHTCGEICHPGSCGEC 382 ****************** PP
2	zf-NF-X1	18.6	4.1e-06	519	537	1	19
zf-NF-X1 1 CGkHkCqklCHeGpCppCp 19 CG+H+C++lCH G CppC OVA01126.1 519 CGQHSCESLCHSGHCPPCL 537 ******************6 PP

Sequence ? help Back to Top
Protein Sequence Length: 1115 aa Download sequence
MSFQSRNDRR EGYRIPVRNN NINNTRQEWV PRGGGGGGEG STGILETPPP PTVNSNPNWR 60 NVGNSDSNYN PAHFESRPRG NFVHQRSYVS RPVNSRKEND GKTQVAKNPN TNSSLPQLVQ 120 EIQEKLMKGT VECMICYDMV RRSAPIWSCS SCFSIFHLNC IKKWARAPTS VDLSAEKNQG 180 LNWRCPGCQS VQLLTSKELR YICFCGKRPD PPSDLYLTPH SCGEPCGKPL EKQIHSGFNG 240 DDGDHCPHLC VLQCHPGPCP PCKAFAPARS CPCGKKMITT RCSDRKSVLT CGQRCNKVLE 300 CGRHHCKKIC HTGPCEPCAV PMNAACFCKK KMEVVLCGEM AVKGELIEKD GVFSCNSICS 360 KTLVCGNHTC GEICHPGSCG ECELMPWKIK SCYCGKTRLQ NERKSCLDPI PTCSNTCGKT 420 LPCQIHRCKD ICHVGDCSPC LVIVNQKCRC GSSSRTIECY KTMEDKDKFC CEKPCGRKKN 480 CGRHRCSERC CPLSNSSNRS SGDWDPHLCS MICGKKLRCG QHSCESLCHS GHCPPCLETI 540 FTDLTCACGK TSIPPPLPCG TPPPSCQHPC SVPQPCGHSS SHGCHFGDCP PCSVPVAKEC 600 IGGHVVLRNI PCGSKEIRCN QLCGKTRQCG MHACGRTCHP PPCDSSCGSV PGSKSSCGQI 660 CGAPRRDCRH TCTASCHPAA PCPDLRCDFP VTITCSCGRI TATVPCDAGG NGGGFTGDTV 720 FEASVIQKLP VPLQPVEANG KKISLGQRKL VCDDDCVKME RKRVLADAFD ITTPNLDALH 780 FGENSSVSDQ LADLFRQEPK WVLSIEERFK FLVLGKSKGG STNGLRVHVF CPMLKEKRDA 840 VRQIAERWKL SVHAAGWEPK RFLVVHVTPK SKAPARVLGF KGSSLPLNSS NPPAFDPLVD 900 MDQRLVVALL DLPRDADVSA LVLRFGGECE LVWLNDKNAL AVFSDPARAA TALRRLDHGS 960 VYQGAVVVYN SASSGTNAWV GGAGSAKEGG TVGALKTNAW KKAVVQEPCW GEDSWGIDHD 1020 SSGNALDTQN SVWKGKEGPI TASKNRYNVL DQDSISNSAS ASSGGIEIPS NNRIGSCSSS 1080 TELKSSNLEI KSGGVGIRKE EEASEVVDDW EKAYE

Sequence ? help Back to Top

Protein Sequence Length: 1115 aa Download sequence

MSFQSRNDRR EGYRIPVRNN NINNTRQEWV PRGGGGGGEG STGILETPPP PTVNSNPNWR  60
NVGNSDSNYN PAHFESRPRG NFVHQRSYVS RPVNSRKEND GKTQVAKNPN TNSSLPQLVQ  120
EIQEKLMKGT VECMICYDMV RRSAPIWSCS SCFSIFHLNC IKKWARAPTS VDLSAEKNQG  180
LNWRCPGCQS VQLLTSKELR YICFCGKRPD PPSDLYLTPH SCGEPCGKPL EKQIHSGFNG  240
DDGDHCPHLC VLQCHPGPCP PCKAFAPARS CPCGKKMITT RCSDRKSVLT CGQRCNKVLE  300
CGRHHCKKIC HTGPCEPCAV PMNAACFCKK KMEVVLCGEM AVKGELIEKD GVFSCNSICS  360
KTLVCGNHTC GEICHPGSCG ECELMPWKIK SCYCGKTRLQ NERKSCLDPI PTCSNTCGKT  420
LPCQIHRCKD ICHVGDCSPC LVIVNQKCRC GSSSRTIECY KTMEDKDKFC CEKPCGRKKN  480
CGRHRCSERC CPLSNSSNRS SGDWDPHLCS MICGKKLRCG QHSCESLCHS GHCPPCLETI  540
FTDLTCACGK TSIPPPLPCG TPPPSCQHPC SVPQPCGHSS SHGCHFGDCP PCSVPVAKEC  600
IGGHVVLRNI PCGSKEIRCN QLCGKTRQCG MHACGRTCHP PPCDSSCGSV PGSKSSCGQI  660
CGAPRRDCRH TCTASCHPAA PCPDLRCDFP VTITCSCGRI TATVPCDAGG NGGGFTGDTV  720
FEASVIQKLP VPLQPVEANG KKISLGQRKL VCDDDCVKME RKRVLADAFD ITTPNLDALH  780
FGENSSVSDQ LADLFRQEPK WVLSIEERFK FLVLGKSKGG STNGLRVHVF CPMLKEKRDA  840
VRQIAERWKL SVHAAGWEPK RFLVVHVTPK SKAPARVLGF KGSSLPLNSS NPPAFDPLVD  900
MDQRLVVALL DLPRDADVSA LVLRFGGECE LVWLNDKNAL AVFSDPARAA TALRRLDHGS  960
VYQGAVVVYN SASSGTNAWV GGAGSAKEGG TVGALKTNAW KKAVVQEPCW GEDSWGIDHD  1020
SSGNALDTQN SVWKGKEGPI TASKNRYNVL DQDSISNSAS ASSGGIEIPS NNRIGSCSSS  1080
TELKSSNLEI KSGGVGIRKE EEASEVVDDW EKAYE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G10170.1	0.0	NF-X1 family protein