PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OVA01130.1
Organism
Macleaya cordata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
Family BBR-BPC
Protein Properties Length: 304aa    MW: 33413.9 Da    PI: 10.466
Description BBR-BPC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OVA01130.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GAGA_bind300.65.8e-92253048301
   GAGA_bind   8 ernkg..yyepaaslkenlglqlmssiaerdaki....rernlalsekkaava.erd.........maflqrdkalaernkalverdnkllalllvens 90 
                  r +g  y+e++ +   +lgl+l s +++rd+k+    r+  + ++++++ ++ +rd         m+f++   +l++       +++k+l+ l+ +  
  OVA01130.1  25 LRGWGggYFEQSMKGGGHLGLHLRSPVTDRDTKPflsaRNPAAVVATSNGGYHqHRDygvseshipMEFVRDGGWLNQ------SQRDKYLSGLPGNP- 116
                 3888778***9977778*******************988888888899988872566************9999*****......78889999999544. PP

   GAGA_bind  91 lasalpvgvqvlsgtksidslqqlsepqledsavelreeeklealpieeaaeeakekkkkkkrqrakkpkekkakkkkkksekskkkvkkesaderska 189
                        + +v+s+t+  + lq+l++p+l+++       e      ++ ++  +k +   kkr  ++ +k++k kk k+   + k++++++   +rsk 
  OVA01130.1 117 -------NFTVISETSGSHPLQMLQQPDLSKE-------E----RMVKVEEGANKGNGPLKKRPGGRAQKSPKPKKSKR---VVKDESNSSV--QRSKP 192
                 .......4789999999999999555444332.......2....22333344455555555555566666666666666...3334455555..789** PP

   GAGA_bind 190 ekksidlvlngvslDestlPvPvCsCtGalrqCYkWGnGGWqSaCCtttiSvyPLPvstkrrgaRiagrKmSqgafkklLekLaaeGydlsnpvDLkdh 288
                  k+s+++v+ng++lD s++P+PvCsCtG+++qCY+WG+GGWqSaCCtt+iS+yPLP+s krrgaRiagrKmSqgafkk+LekLa+eGy+lsnp+DL++h
  OVA01130.1 193 MKRSMGVVINGIDLDLSGIPIPVCSCTGTPQQCYRWGCGGWQSACCTTSISMYPLPMSNKRRGARIAGRKMSQGAFKKVLEKLATEGYNLSNPIDLRTH 291
                 *************************************************************************************************** PP

   GAGA_bind 289 WAkHGtnkfvtir 301
                 WAkHGtnkfvtir
  OVA01130.1 292 WAKHGTNKFVTIR 304
                 ************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 304 aa     Download sequence    
MEGDNGYMRS SGDNGFLRSG DNQFLRGWGG GYFEQSMKGG GHLGLHLRSP VTDRDTKPFL  60
SARNPAAVVA TSNGGYHQHR DYGVSESHIP MEFVRDGGWL NQSQRDKYLS GLPGNPNFTV  120
ISETSGSHPL QMLQQPDLSK EERMVKVEEG ANKGNGPLKK RPGGRAQKSP KPKKSKRVVK  180
DESNSSVQRS KPMKRSMGVV INGIDLDLSG IPIPVCSCTG TPQQCYRWGC GGWQSACCTT  240
SISMYPLPMS NKRRGARIAG RKMSQGAFKK VLEKLATEGY NLSNPIDLRT HWAKHGTNKF  300
VTIR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G01930.19e-89BBR-BPC family protein