PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA01153.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

HB-other

Protein Properties

Length: 523aa MW: 59858 Da PI: 8.8939

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA01153.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	56.6	4.5e-18	22	77	2	57
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 +kR+ t+ q+e+Le+++++++yp++e+++e Akk+gL+e+qV+ WF+ rR k+k+ OVA01153.1 22 KKRRFKTPFQVEALENFYKEHKYPNEEMKAEFAKKVGLSEKQVSGWFCHRRLKDKR 77 89999*************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 523 aa Download sequence
MGILEPCDVH PDEDKVLSEK SKKRRFKTPF QVEALENFYK EHKYPNEEMK AEFAKKVGLS 60 EKQVSGWFCH RRLKDKRLSK DEACANGRQD LSSGVIQDRG SGLKQDSCSS TKQGNNRHFD 120 LREVESRRFD DPDYTALDHA YENKRPTGKY STMENNSSGS SSTSQERLFP QSLTSCDMES 180 SRYPSKSSNY MSITKGVKNK GKMMVSGYLH LQDEIANAAI TAVKRQLGRH FREDGPPLGI 240 EFQPLPPDAF DSPVHLIHEP YQMADPIRQN SHGISKAHKE PRIETRIPRY HHEICPQGSY 300 PDGGHIKRTK SVHRECTSYP SMGNSSFNSY SNHVPEEYPD MDNMDESSAV VASMINSNNN 360 FMRSKYGVKG VKSHSTVNHR LRPIMGKVIS GESSHLQLHK YDGPRPCMSQ RREYVEAKPL 420 NLVNQHREAF DAMDSVAKEE NLHRDRRMYR KYDNPVRVKK HLKNDTRVGR RVLGDELLPQ 480 DYVLRTPYPE ELLPSRNQIK ERVGEMQASS REDDTAATSS SMD

Sequence ? help Back to Top

Protein Sequence Length: 523 aa Download sequence

MGILEPCDVH PDEDKVLSEK SKKRRFKTPF QVEALENFYK EHKYPNEEMK AEFAKKVGLS  60
EKQVSGWFCH RRLKDKRLSK DEACANGRQD LSSGVIQDRG SGLKQDSCSS TKQGNNRHFD  120
LREVESRRFD DPDYTALDHA YENKRPTGKY STMENNSSGS SSTSQERLFP QSLTSCDMES  180
SRYPSKSSNY MSITKGVKNK GKMMVSGYLH LQDEIANAAI TAVKRQLGRH FREDGPPLGI  240
EFQPLPPDAF DSPVHLIHEP YQMADPIRQN SHGISKAHKE PRIETRIPRY HHEICPQGSY  300
PDGGHIKRTK SVHRECTSYP SMGNSSFNSY SNHVPEEYPD MDNMDESSAV VASMINSNNN  360
FMRSKYGVKG VKSHSTVNHR LRPIMGKVIS GESSHLQLHK YDGPRPCMSQ RREYVEAKPL  420
NLVNQHREAF DAMDSVAKEE NLHRDRRMYR KYDNPVRVKK HLKNDTRVGR RVLGDELLPQ  480
DYVLRTPYPE ELLPSRNQIK ERVGEMQASS REDDTAATSS SMD

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	22	27	KKRRFK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G03250.1	8e-65	HB-other family protein