PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OVA01224.1
Organism
Macleaya cordata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
Family B3
Protein Properties Length: 463aa    MW: 53692.3 Da    PI: 8.501
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OVA01224.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B347.33.6e-15231001799
                 E--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
          B3  17 vlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
                 ++p +f++++ g+++ es  +  +++sgr W +kl  ++  +  ++++GW++Fv++n L+ gD++v++++g+s+f  +vk++ k
  OVA01224.1  23 SIPADFIKHFnGIVPDES--ILRTSSSGRCWIIKL--KRVEENLFFQQGWSDFVEDNYLEFGDSLVLEYIGNSQF--YVKIYGK 100
                 8******77777776664..666789*********..999999********************************..9999876 PP
2B340.45.4e-132062831396
                 TT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS
          B3  13 sgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96 
                 + ++ +p kf++e ggk   ++ + l+d  g  W + l  rk +gr+++++GWk+F + +   +  f++F++dg+s+f   v++
  OVA01224.1 206 EYQVEIPEKFLREVGGK--LPVGVFLKDHGGIIWPIGL--RKADGRVWFEDGWKQFIEYHSTSDQHFLIFRYDGNSQF--DVSI 283
                 55688*********999..8999***************..**********************************9999..6665 PP
Sequence ? help Back to Top
Protein Sequence    Length: 463 aa     Download sequence    
MGSQNTHRPS LAYLANCLRI SASIPADFIK HFNGIVPDES ILRTSSSGRC WIIKLKRVEE  60
NLFFQQGWSD FVEDNYLEFG DSLVLEYIGN SQFYVKIYGK NGCEKELPYN IEKPINPGKK  120
KEQELKTKEK FTKCHPGCEH KYYEAKWGRD SVGFDNNKKI CGSCKCVEPT RRKMAVNNER  180
TGVPEAGCSF KAERPYFILT WKQKKEYQVE IPEKFLREVG GKLPVGVFLK DHGGIIWPIG  240
LRKADGRVWF EDGWKQFIEY HSTSDQHFLI FRYDGNSQFD VSILNITNKS AYEMKDFDDF  300
QHHEEPNLDK RCQFNEENRN KSTHGTKSRY KNKRRTGSMS SLEEIPNCRY KKKKSSGDHG  360
KMREGSDSNE SNQTKQQSEE SSPGEGNERI HRSSINDEDK EESLETEKQE EIEEKDYVEC  420
LDVDDSSSSI EVSAVAKKRA VNIKKKNKKT QISDQKQKIR RLK
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1333354KRRTGSMSSLEEIPNCRYKKKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.17e-20B3 family protein