PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OVA01272.1
Organism
Macleaya cordata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
Family C2H2
Protein Properties Length: 249aa    MW: 27383.2 Da    PI: 5.6548
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OVA01272.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.30.000127698123
                EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                y+C+ C + F++   L  H+++H
  OVA01272.1 76 YTCTFCRREFRSAQALGGHMNVH 98
                9********************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 249 aa     Download sequence    
MATELGLLSL NQLQKLAHQA QQQQQPNSTT TPTGGSPWMW NSRRSTPHDD DDSWEVRAFA  60
EDTNNIMGTT WPPRSYTCTF CRREFRSAQA LGGHMNVHRR DRARLRQSPP ISADPSSSST  120
SSSTLIFPTQ EFLAANGGLC LFYPLSTSPA SSVFTSTSIN GCMELSPSTL LPMSNYATNN  180
LISSSSYPPV SFSGVTSTIE PSAAAASINS EKDDEKNNNN IQLQYFNNKN NMQFVEELDL  240
ELRLGSSKP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17810.18e-33C2H2 family protein