PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA01508.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

Protein Properties

Length: 401aa MW: 46245.1 Da PI: 5.0089

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA01508.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	40.7	4.3e-13	40	115	17	98
E--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS B3 17 vlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 vlpkkf++++g+ e s +++ +sg W ++l rk +++ +++GW eF + +++g f++F++dg+s f +v +f+ OVA01508.1 40 VLPKKFIKKFGE--ELSEVAVVTVPSGTIWHIEL--RKAEDEISFESGWPEFLDYYSIRVGHFLLFRYDGNSYF--RVFIFD 115 8*******84..4887888888******..********************************9998..777776 PP
2	B3	69.1	5.9e-22	304	395	4	99
E-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS B3 4 vltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 ++ ps+v k+ +l +p +fa + ++k+e +tl ++gr W v++ +++ + l +GW+eFv +n+LkegD++vF+l++r++fe +v++fr OVA01508.1 304 IMRPSYVDKTFILHVPSNFAMVYLNEKTE--SVTLHVSDGRMWPVQC--ISGDRYTKLIRGWREFVLDNHLKEGDVCVFELVERNDFEINVSIFRV 395 6889**************988666666..59999999****..67777788999********************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 401 aa Download sequence
MRCLFRNRFV HYIESPRLQL PELKMITPAL NCILLLLDYV LPKKFIKKFG EELSEVAVVT 60 VPSGTIWHIE LRKAEDEISF ESGWPEFLDY YSIRVGHFLL FRYDGNSYFR VFIFDTSASE 120 IEYPCHIMGF EEPNHETESQ APATLDTNFM EIPDVPFPWP TRNEDEREAR VLADKQNESD 180 QVEQNGREKF TFSFKGPEVI SIHSDSTQSS DEPTMPTLRK SSSSRAKKDE VEGRSLNQKS 240 SRAEFSSHRV NRRTEPDEHK DLSLQEKASA SVPTTSTAPL ATRVKGALEA ARAFESENPF 300 CTIIMRPSYV DKTFILHVPS NFAMVYLNEK TESVTLHVSD GRMWPVQCIS GDRYTKLIRG 360 WREFVLDNHL KEGDVCVFEL VERNDFEINV SIFRVSEEDV V

Sequence ? help Back to Top

Protein Sequence Length: 401 aa Download sequence

MRCLFRNRFV HYIESPRLQL PELKMITPAL NCILLLLDYV LPKKFIKKFG EELSEVAVVT  60
VPSGTIWHIE LRKAEDEISF ESGWPEFLDY YSIRVGHFLL FRYDGNSYFR VFIFDTSASE  120
IEYPCHIMGF EEPNHETESQ APATLDTNFM EIPDVPFPWP TRNEDEREAR VLADKQNESD  180
QVEQNGREKF TFSFKGPEVI SIHSDSTQSS DEPTMPTLRK SSSSRAKKDE VEGRSLNQKS  240
SRAEFSSHRV NRRTEPDEHK DLSLQEKASA SVPTTSTAPL ATRVKGALEA ARAFESENPF  300
CTIIMRPSYV DKTFILHVPS NFAMVYLNEK TESVTLHVSD GRMWPVQCIS GDRYTKLIRG  360
WREFVLDNHL KEGDVCVFEL VERNDFEINV SIFRVSEEDV V

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G18990.1	5e-60	B3 family protein