PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA01549.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

MYB

Protein Properties

Length: 290aa MW: 33527.8 Da PI: 8.2625

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA01549.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	54.3	3.1e-17	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++l+++++ +G g+W++ ++ g+ R++k+c++rw +yl OVA01549.1 14 KGAWTKEEDQRLINYIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINYL 61 79****************************99**********97 PP
2	Myb_DNA-binding	59.4	7.8e-19	67	111	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg++T+eEde++++++ +lG++ W++Ia +++ gRt++++k++w+++ OVA01549.1 67 RGNFTEEEDEIIIKLHSLLGNK-WSLIAGRLP-GRTDNEIKNYWNTH 111 89******************.*****.**********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 290 aa Download sequence
MGRSPCCEKA HTNKGAWTKE EDQRLINYIR AHGEGCWRSL PKAAGLLRCG KSCRLRWINY 60 LRPDLKRGNF TEEEDEIIIK LHSLLGNKWS LIAGRLPGRT DNEIKNYWNT HIKRKLLSRG 120 LDPQTHRPIT TTTKNINGDI NNNSYSDHHN KQISDVNSIE EANSSSGTTE EFVHQQQKVQ 180 EEEFHPELNL IRTKKQNYPE LNLDLSISLP IQCYDQNEIM KQEEEKQKVS YQVFDTAAKP 240 PVITQTICLC YQLGFQSREG CNCKAMMSNN RSTTMNLNNG FHLYFRPLDS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38620.1	6e-94	MYB family protein