PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA01557.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

MYB

Protein Properties

Length: 392aa MW: 44046.6 Da PI: 6.6457

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA01557.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	56.4	7.1e-18	13	60	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg W++eEde+l+++++ +G g+W+++++ g+ R++k+c++rw +yl OVA01557.1 13 RGLWSPEEDEKLIRCITTHGHGCWSSVPKLAGLQRCGKSCRLRWINYL 60 788*******************************************97 PP
2	Myb_DNA-binding	49.9	7.2e-16	66	109	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+++++E+ ++d+++ lG++ W+ Ia++++ gRt++++k++w++ OVA01557.1 66 RGSFSPQEERVIIDVHRILGNR-WAQIAKHLP-GRTDNEVKNFWNS 109 899*****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 392 aa Download sequence
MGHHCCSKQK VKRGLWSPEE DEKLIRCITT HGHGCWSSVP KLAGLQRCGK SCRLRWINYL 60 RPDLKRGSFS PQEERVIIDV HRILGNRWAQ IAKHLPGRTD NEVKNFWNSC IKKKLIAQGL 120 DPKTHNLMIS SSSSYHHHHQ STASIVNNNN ACNNLNNHIY QQPTSVFPVN SQIILRDPSM 180 EYMMNPPAAA PYVTLLPHPP PPHPLHEAIS IPTNNFDYQN PNLVWTGKDQ NSNASMGLAN 240 CPPLMETKPT SYSSVNPPGF EFTEENCLWG TTTTTSTGIS GTIDHQSFVL PRLQVAAVQP 300 PPPPEEEQQI KQIQQKKAAV FEVVVDEFDE TNEVVLMNNK DGGSHDQEME MSTTSFNSSN 360 FDLEFMDSTI MSCGMYSNMN SSSSMDQLAW DC

Sequence ? help Back to Top

Protein Sequence Length: 392 aa Download sequence

MGHHCCSKQK VKRGLWSPEE DEKLIRCITT HGHGCWSSVP KLAGLQRCGK SCRLRWINYL  60
RPDLKRGSFS PQEERVIIDV HRILGNRWAQ IAKHLPGRTD NEVKNFWNSC IKKKLIAQGL  120
DPKTHNLMIS SSSSYHHHHQ STASIVNNNN ACNNLNNHIY QQPTSVFPVN SQIILRDPSM  180
EYMMNPPAAA PYVTLLPHPP PPHPLHEAIS IPTNNFDYQN PNLVWTGKDQ NSNASMGLAN  240
CPPLMETKPT SYSSVNPPGF EFTEENCLWG TTTTTSTGIS GTIDHQSFVL PRLQVAAVQP  300
PPPPEEEQQI KQIQQKKAAV FEVVVDEFDE TNEVVLMNNK DGGSHDQEME MSTTSFNSSN  360
FDLEFMDSTI MSCGMYSNMN SSSSMDQLAW DC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G12720.1	2e-81	MYB family protein