PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA01767.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

HD-ZIP

Protein Properties

Length: 230aa MW: 25823.4 Da PI: 8.2897

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA01767.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	59.6	5e-19	74	128	2	56
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 rk+ ++tkeq + Lee F++n++++ +++e LA +l+L+ rqV vWFqNrRa+ k OVA01767.1 74 RKKLRLTKEQSRLLEESFRENHTLNPKQKEALAFQLKLKPRQVEVWFQNRRARTK 128 78889************************************************98 PP
2	HD-ZIP_I/II	120.8	7.2e-39	74	162	1	89
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLre 89 +kk+rl+keq++lLEesF+e+++L+p++K++la +L+l+prqv+vWFqnrRARtk+kq+E+++e+Lkr++ +l+een+rL++eve+Lr+ OVA01767.1 74 RKKLRLTKEQSRLLEESFRENHTLNPKQKEALAFQLKLKPRQVEVWFQNRRARTKLKQTEMECEYLKRCFGSLTEENRRLQREVEQLRA 162 69*************************************************************************************93 PP

Sequence ? help Back to Top
Protein Sequence Length: 230 aa Download sequence
MAISPSSPSC LDLTISVPGF ASSPSLPSSE GGHPYNMKNL DINQVPPLME EEYPATSRLV 60 IEDEEESGDG GPPRKKLRLT KEQSRLLEES FRENHTLNPK QKEALAFQLK LKPRQVEVWF 120 QNRRARTKLK QTEMECEYLK RCFGSLTEEN RRLQREVEQL RALRVGPPTV MSPNSCEPLP 180 ASTLTMCPRC ERVTSSSSGA LERGPTATNP LSSFSKAHVL HHPRQPWAAC

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	123	131	RRARTKLKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G01430.1	2e-74	HD-ZIP family protein