PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA01772.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

MYB

Protein Properties

Length: 236aa MW: 26415.1 Da PI: 9.4827

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA01772.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	59.6	6.8e-19	45	90	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+W++eEd+ l ++v q+G ++W++++r+++ gR++k+c++rw + OVA01772.1 45 KGPWSAEEDKVLTRLVDQHGARNWSLVSRYIP-GRSGKSCRLRWCNQ 90 79****************************.*********985 PP
2	Myb_DNA-binding	55.5	1.3e-17	99	141	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 ++++ Ede++++a +++G++ W+tIar ++ gRt++ +k++w++ OVA01772.1 99 PFSPAEDEIILEAQAKYGNR-WATIARLLP-GRTDNAVKNHWNST 141 79****************.*****.*********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 236 aa Download sequence
MEPPNININT SSSTSLCSSS SSESDSSLAG GKQRRGGIRK SERIKGPWSA EEDKVLTRLV 60 DQHGARNWSL VSRYIPGRSG KSCRLRWCNQ LSPNVEHRPF SPAEDEIILE AQAKYGNRWA 120 TIARLLPGRT DNAVKNHWNS TLKRKQREHH HDHYDDHNNN INAGLNMGFR SSSSSSESDP 180 PTNLTLAPPG SSYFVPEVRQ PENVPAGFWD AMRDVIAREV RNYVSSSSFS EQSRSP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G50060.1	4e-56	MYB family protein