PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OVA01776.1
Organism
Macleaya cordata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
Family MIKC_MADS
Protein Properties Length: 228aa    MW: 25911.3 Da    PI: 8.6735
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OVA01776.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF91.93.1e-29959151
                S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
      SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                k+i+n++ rqvtfskRr g++KKAeELSvLCdaeva+iifs tgkl+eyss
  OVA01776.1  9 KKIDNTTARQVTFSKRRRGLFKKAEELSVLCDAEVALIIFSATGKLFEYSS 59
                68***********************************************96 PP
2K-box53.21.2e-18841701298
       K-box  12 akaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 
                  + +  +  +a+L ke+ +  +++R++ Ge+L  L++++LqqLe+ Le +l+++ ++K e ++++i++lq+ke +l een++Lr+++
  OVA01776.1  84 LELQLENSSYARLSKEVAEKSHQLRQMRGEELRGLNIEDLQQLEKSLEAGLSRVLETKGERIMKEIDTLQRKEIQLIEENERLRHQM 170
                 5566778889**************************************************************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 228 aa     Download sequence    
MAREKIQIKK IDNTTARQVT FSKRRRGLFK KAEELSVLCD AEVALIIFSA TGKLFEYSSS  60
SMKEILERHN LHSKNLQKLA QPSLELQLEN SSYARLSKEV AEKSHQLRQM RGEELRGLNI  120
EDLQQLEKSL EAGLSRVLET KGERIMKEID TLQRKEIQLI EENERLRHQM LGVSKSRKCV  180
AVDYSSQNLV QEEGQSSDSV TNFVSNNNSS AGPPPRDYDS SDTSLKLG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G22540.12e-95MIKC_MADS family protein