PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OVA02225.1
Organism
Macleaya cordata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
Family GATA
Protein Properties Length: 273aa    MW: 30984 Da    PI: 8.6862
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OVA02225.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA56.63.4e-18197232136
        GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkglk 36 
                 Cs+C + kTp+WR gp g+ktLCnaCG++y++ +l+
  OVA02225.1 197 CSHCLSEKTPQWRAGPLGPKTLCNACGVRYKSGRLM 232
                 ********************************9976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 273 aa     Download sequence    
MESLETAAWL VDDLLNFSSD IGEGEEEPKQ EVENEDDENR NNKTTNNNNK KVLPSSLPLD  60
SKPLKEEALP NIFDPDKENP FFPEFQEEEL EWLSNENAFP SIETFLPMKP NNVMKHQSPV  120
SIRLENSSSI SCSSSSSSGI MSCCGTLQVP VRARSKRRRR RRSSLLELSG RQWTFWSEPV  180
KKNGGRRMAK TTTGRKCSHC LSEKTPQWRA GPLGPKTLCN ACGVRYKSGR LMPEYRPAGS  240
PTFMTELHSN SHKKVLEMRR QKQKMMSQSL DTG
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1154162RSKRRRRRR
2156161KRRRRR
3156162KRRRRRR
4157162RRRRRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G24050.11e-38GATA family protein