PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA02292.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

MYB

Protein Properties

Length: 235aa MW: 27646.9 Da PI: 8.2314

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA02292.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	61.4	1.9e-19	21	68	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd+ll+++v ++G g+W+++ar g++R +k+c++rw +yl OVA02292.1 21 KGPWTAEEDKLLIEYVSLHGEGRWNSVARFAGLKRNGKSCRLRWVNYL 68 79********************************************97 PP
2	Myb_DNA-binding	54.4	2.8e-17	74	118	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rgr T+ E+ +++++++++G++ W+tIar ++ gRt++++k++w+++ OVA02292.1 74 RGRITPHEENIILELHARWGNR-WSTIARSLP-GRTDNEIKNYWRTH 118 899*****************.*****.**********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 235 aa Download sequence
MFEGVMEGHL GWGILEEGWR KGPWTAEEDK LLIEYVSLHG EGRWNSVARF AGLKRNGKSC 60 RLRWVNYLRP DLKRGRITPH EENIILELHA RWGNRWSTIA RSLPGRTDNE IKNYWRTHFK 120 KKGQNSSEHS EKSKNRLLRR QQFQYQQQQQ QQQLQQQQQQ NQVDMKKIMS LLDENDNRSV 180 SSCLAMYPNN NYDEQYVISS MWNGGQVAAT DGSTEDIIWD GLWNLDEVHA NLDAM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G24310.1	2e-82	MYB family protein