PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OVA02403.1
Organism
Macleaya cordata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
Family MYB_related
Protein Properties Length: 242aa    MW: 27877.1 Da    PI: 5.1831
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OVA02403.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding54.72.3e-174489148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     rg+++ eE+e++++++++lG++ W++Ia++++ gRt++++k+ w+++l
       OVA02403.1 44 RGNFSSEEEEIIIKLHEMLGNR-WSAIAARLP-GRTDNEIKNVWHTHL 89
                     89********************.*********.************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 242 aa     Download sequence    
MHVKKTQQNL EGLLDLFDRG FAPHRCGKSC RLRWTNYLRP DIKRGNFSSE EEEIIIKLHE  60
MLGNRWSAIA ARLPGRTDNE IKNVWHTHLK KKLKQNQTIS EPKPQYPNKI SKCESESTSE  120
SESMNYLNQP RFENQNYLLL SPQQSSSDFP SGTDFSVATV DNHDMNMKNE YKEIDENFWS  180
EAFTIENFSI EAEFPAITTN PCLQIPTSPV SSTTSSSNLH DMDFWYNLLM EAGESLVLAG  240
EF
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
18995LKKKLKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23250.11e-44MYB family protein