PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OVA02444.1
Organism
Macleaya cordata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
Family LBD
Protein Properties Length: 246aa    MW: 27676.8 Da    PI: 5.2214
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OVA02444.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260123.98e-3971071100
      DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallk 98 
                 +C aCk+lrrkC+++Cv+apyf++eq + +fa++hk+FGasnv+kll++lp  +r +a+ ++ yeA+ar++dP+yG+v++i++lqqq+ +l+a+la+lk
  OVA02444.1   7 PCGACKFLRRKCVRGCVFAPYFCHEQgATHFAAIHKVFGASNVSKLLTHLPVADRCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVNLQAQLASLK 105
                 7*************************89********************************************************************998 PP

      DUF260  99 ee 100
                 ++
  OVA02444.1 106 AQ 107
                 76 PP
Sequence ? help Back to Top
Protein Sequence    Length: 246 aa     Download sequence    
MTGFGSPCGA CKFLRRKCVR GCVFAPYFCH EQGATHFAAI HKVFGASNVS KLLTHLPVAD  60
RCEAAVTISY EAQARLQDPI YGCVSHIFAL QQQVVNLQAQ LASLKAQQAA QGFVNGSSNS  120
RPDQEDKLFY GDHFPTYPQD IQALNIHLNE AKISQQLYQN PSVNDIDQTM FYYENEVMDS  180
NQISSDYYEH STTPEETMQF STTSFEDSSH AAMASIDMQM NNARKWLFQD TEDLQSMAFA  240
YFQHSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58190.17e-56LBD family protein