PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OVA02445.1
Organism
Macleaya cordata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
Family LBD
Protein Properties Length: 211aa    MW: 23471.6 Da    PI: 7.6527
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OVA02445.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260122.42.4e-38121121100
      DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallk 98 
                 +C aCk+lrrkCa+dC++apyf++eq p++fa++hk+FGasn +kll++++  er +a+++++yeA+ar+rdPvyG+v++i++lqqq++ l+++l ++k
  OVA02445.1  12 PCGACKFLRRKCASDCIFAPYFCSEQgPAQFAAIHKVFGASNASKLLSQVQVPERCEAVATIAYEAQARIRDPVYGCVAHIFALQQQVAFLQTQLMQMK 110
                 7*************************99*******************************************************************9998 PP

      DUF260  99 ee 100
                 ++
  OVA02445.1 111 AQ 112
                 87 PP
Sequence ? help Back to Top
Protein Sequence    Length: 211 aa     Download sequence    
MIMASVTGSG SPCGACKFLR RKCASDCIFA PYFCSEQGPA QFAAIHKVFG ASNASKLLSQ  60
VQVPERCEAV ATIAYEAQAR IRDPVYGCVA HIFALQQQVA FLQTQLMQMK AQLVYNTNGN  120
SRYLENNWTG NYITGAGSQN FSNNPTKYMY SISPQSSLDS IENENINIGI REEVQAYKDD  180
DLSFQTNCSK KIIFQNELNE LQAVALRMMR N
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G42430.18e-68LBD family protein