PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA02532.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

TALE

Protein Properties

Length: 484aa MW: 55256.2 Da PI: 5.6015

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA02532.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	24	6.4e-08	283	315	23	55
SS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS Homeobox 23 rypsaeereeLAkklgLterqVkvWFqNrRake 55 +yp++ e+ +L +++gL+++q+++WF N+R ++ OVA02532.1 283 PYPTEVEKMKLVEETGLDQKQITNWFINQRKRH 315 8*****************************885 PP
2	Homeobox	17.2	8.8e-06	424	450	29	55
HHHHHHHHCTS-HHHHHHHHHHHHHHH CS Homeobox 29 ereeLAkklgLterqVkvWFqNrRake 55 e+ +L +++gL+++q+++WF N+R ++ OVA02532.1 424 EKMKLVEETGLDQKQITNWFINQRKRH 450 6778999*****************885 PP
3	ELK	32.9	1.4e-11	236	256	2	22
ELK 2 LKhqLlrKYsgyLgsLkqEFs 22 LK+ Ll+KYsgyL+sL++EF+ OVA02532.1 236 LKDLLLHKYSGYLCSLRKEFN 256 9*******************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 484 aa Download sequence
MEEFYRTDPA RITSSDHHQD HEYFFDGLGS FNPMDNLMIQ FDDHEDHRSE IFGSDQLSFD 60 LIRAQITCHP RYPSLVSSYI ECRKVGAPPE IASLLDEAVC SLDNHTTTDG CFTEIGADPE 120 LDQFMELYCI FLKRYKDELS KPLDEATTFL SQIETQLGTL FNDTSTTTTT SVNCPSGNTS 180 HFNLIFQSTG SSEEQSCSVD AVELASDQTQ KAATTSTSTT TTTTAAVAPQ YGDRALKDLL 240 LHKYSGYLCS LRKEFNKKRK KGKLPRDARI TLLDWWKSHS RWPYPTEVEK MKLVEETGLD 300 QKQITNWFIN QRKRHWKPSE DQRISIMDTV TNTLYFEIGQ GTVLGKSSTR RGRKGSYQGM 360 PELHCWTGGS PTLDGLIPRC LPACNVHFLI CVCIVYMMKF KHGLLLVVLE RLNEMKDDGS 420 QEVEKMKLVE ETGLDQKQIT NWFINQRKRH WKPSEDQRIS IMDTVTNTLY FEIGQGTGTI 480 TDDQ

Sequence ? help Back to Top

Protein Sequence Length: 484 aa Download sequence

MEEFYRTDPA RITSSDHHQD HEYFFDGLGS FNPMDNLMIQ FDDHEDHRSE IFGSDQLSFD  60
LIRAQITCHP RYPSLVSSYI ECRKVGAPPE IASLLDEAVC SLDNHTTTDG CFTEIGADPE  120
LDQFMELYCI FLKRYKDELS KPLDEATTFL SQIETQLGTL FNDTSTTTTT SVNCPSGNTS  180
HFNLIFQSTG SSEEQSCSVD AVELASDQTQ KAATTSTSTT TTTTAAVAPQ YGDRALKDLL  240
LHKYSGYLCS LRKEFNKKRK KGKLPRDARI TLLDWWKSHS RWPYPTEVEK MKLVEETGLD  300
QKQITNWFIN QRKRHWKPSE DQRISIMDTV TNTLYFEIGQ GTVLGKSSTR RGRKGSYQGM  360
PELHCWTGGS PTLDGLIPRC LPACNVHFLI CVCIVYMMKF KHGLLLVVLE RLNEMKDDGS  420
QEVEKMKLVE ETGLDQKQIT NWFINQRKRH WKPSEDQRIS IMDTVTNTLY FEIGQGTGTI  480
TDDQ

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	251	260	LRKEFNKKRK
2	257	261	KKRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G70510.1	1e-67	TALE family protein