PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA02553.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

CAMTA

Protein Properties

Length: 952aa MW: 108348 Da PI: 7.6105

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA02553.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	142.5	1.2e-44	81	187	10	116
CG-1 10 kneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqrrcywlLeeelek 108 +++e++aiL n++ ++++ ++ + pk g+++Ly+rk++r+frkDG++wkkkkdgk+v+E+he+LKv + e +++yYah+++ p+f rrcywlL++ +e+ OVA02553.1 81 EANEVHAILCNHTYFNIHINPIHLPKGGTIVLYDRKMLRNFRKDGHNWKKKKDGKSVKEAHEHLKVCNQERIHVYYAHGQDIPNFARRCYWLLDKYREH 179 6789********************************************************************************************* PP CG-1 109 ivlvhyle 116 ivlvhy+e OVA02553.1 180 IVLVHYRE 187 ****97 PP

Sequence ? help Back to Top
Protein Sequence Length: 952 aa Download sequence
MFMESSIPGR LAGWEIHGFL TMEDLDIEKL MKFMQYSVTT LTSTSTSTPY TCQKIIYMFM 60 ESSIPGRLAG WEIHGFLTME EANEVHAILC NHTYFNIHIN PIHLPKGGTI VLYDRKMLRN 120 FRKDGHNWKK KKDGKSVKEA HEHLKVCNQE RIHVYYAHGQ DIPNFARRCY WLLDKYREHI 180 VLVHYREILE LQGSLVTPVN SNSCASYSDT SVSKILSEET DSGTDNAFYA SDGNYVNTIV 240 DNISVRNHEM RLHEINTLDW EDLLVSNDPD ESTAPKTGNK GNLCPSYNIP GVMSSFGHSS 300 KSMASSVPID VKLPISAYPQ AMNSTVQRKD FESATMGADE LSTLFVKDGL QTQDSFEMWL 360 DNIMVDSPVS LVNLPVESSI STGHESNTSM LVDHQWHCTQ EQVFCITDVS PAWAYSTDET 420 KVITIGYFQG AYSHIAESSL FCVFGDVCVP AERVRIGVFR CRALPRIPGF VNFYLSLDGH 480 TPISQVLTFE YRPTPIEWVA SLNEKPNLEE FRVQLRLDSL LFSTTNSLNI LSSKLTSTSL 540 NLAKEFSLIT SSIDKDWENL NNSIEKREIS LSQAQRILFE LTLKCNLKEW LLERVVEGCT 600 SGIRDHQGQG VIHMCTILGY TWAVQLYSRL GLLLDFRDAF CWTALHWAAF YGRKEMVAVL 660 LLEGADPSLV TDPTSEFPGG CTAADIAAKS GHDGLAAYLA EKGLTAHFRL MSLSGNISGS 720 LQLDTSYLVN SGNLSEEQLC LKDTFAAYNT CANAASRIQA ALLGKSLMLQ TKAIHHTEPE 780 IEACNRIAAM KIQHAFRRYE IRKRMKSAAR IQHRFRTWKI QKDFLNMRWR AIKIQAAFRG 840 HKMRKQYQKI IWSVGVLEKA ILRWRQKRKG FRGLQPQITE VIAVDQKEEN DIHEDFFRVS 900 HKQAIDRIER SVIRVQALFR SYRAQQEYRK MKLTYDQGKV DYFSRASPKV AI

Sequence ? help Back to Top

Protein Sequence Length: 952 aa Download sequence

MFMESSIPGR LAGWEIHGFL TMEDLDIEKL MKFMQYSVTT LTSTSTSTPY TCQKIIYMFM  60
ESSIPGRLAG WEIHGFLTME EANEVHAILC NHTYFNIHIN PIHLPKGGTI VLYDRKMLRN  120
FRKDGHNWKK KKDGKSVKEA HEHLKVCNQE RIHVYYAHGQ DIPNFARRCY WLLDKYREHI  180
VLVHYREILE LQGSLVTPVN SNSCASYSDT SVSKILSEET DSGTDNAFYA SDGNYVNTIV  240
DNISVRNHEM RLHEINTLDW EDLLVSNDPD ESTAPKTGNK GNLCPSYNIP GVMSSFGHSS  300
KSMASSVPID VKLPISAYPQ AMNSTVQRKD FESATMGADE LSTLFVKDGL QTQDSFEMWL  360
DNIMVDSPVS LVNLPVESSI STGHESNTSM LVDHQWHCTQ EQVFCITDVS PAWAYSTDET  420
KVITIGYFQG AYSHIAESSL FCVFGDVCVP AERVRIGVFR CRALPRIPGF VNFYLSLDGH  480
TPISQVLTFE YRPTPIEWVA SLNEKPNLEE FRVQLRLDSL LFSTTNSLNI LSSKLTSTSL  540
NLAKEFSLIT SSIDKDWENL NNSIEKREIS LSQAQRILFE LTLKCNLKEW LLERVVEGCT  600
SGIRDHQGQG VIHMCTILGY TWAVQLYSRL GLLLDFRDAF CWTALHWAAF YGRKEMVAVL  660
LLEGADPSLV TDPTSEFPGG CTAADIAAKS GHDGLAAYLA EKGLTAHFRL MSLSGNISGS  720
LQLDTSYLVN SGNLSEEQLC LKDTFAAYNT CANAASRIQA ALLGKSLMLQ TKAIHHTEPE  780
IEACNRIAAM KIQHAFRRYE IRKRMKSAAR IQHRFRTWKI QKDFLNMRWR AIKIQAAFRG  840
HKMRKQYQKI IWSVGVLEKA ILRWRQKRKG FRGLQPQITE VIAVDQKEEN DIHEDFFRVS  900
HKQAIDRIER SVIRVQALFR SYRAQQEYRK MKLTYDQGKV DYFSRASPKV AI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G16150.1	0.0	CAMTA family protein