PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OVA02584.1
Organism
Macleaya cordata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
Family C3H
Protein Properties Length: 236aa    MW: 26849.3 Da    PI: 6.0439
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OVA02584.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH40.25.6e-13161185226
                 -S---SGGGGTS--TTTTT-SS-SS CS
     zf-CCCH   2 ktelCrffartGtCkyGdrCkFaHg 26 
                 ktelC+ + +tG C+yG+rC+FaHg
  OVA02584.1 161 KTELCNKWEETGCCPYGERCQFAHG 185
                 8***********************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 236 aa     Download sequence    
MEETQETSQA SKSYTSTPSS GYSYEADSLS VKLNRDFPRN WFELKRQGIL MNYEEMLVRY  60
NNCFVCLQQK FTEVNLLEEE NLKLRAENLD LSMLISAKEK DIISSITGLS SSKGDSSSGA  120
NNPNLLRLAA SKLPQIWNTQ CGEEKGKGVE LLEVYNQGMA KTELCNKWEE TGCCPYGERC  180
QFAHGIEELR PVIRHPRYKT EICRMISSGT ANCPYGHRCH FRHSLDPNED KAQVLL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68200.12e-42C3H family protein