PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA02706.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

Trihelix

Protein Properties

Length: 264aa MW: 31669 Da PI: 8.4828

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA02706.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	77.9	1.5e-24	19	101	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 +W+ qe+++ +++r e+++++ ++k++k lWe +s km+e+gf rs+ qCk+kw+nl +ryk ++++e + ++++p++++l+ OVA02706.1 19 QWSFQETKEFLAIRAELDQTFMETKRNKLLWEVISTKMKEKGFLRSADQCKCKWKNLVTRYKGCETIEPDS---MRQQFPFYNELQ 101 7******************************************************************94...45589**997 PP

Sequence ? help Back to Top
Protein Sequence Length: 264 aa Download sequence
MEGHHHSISM EAAGDRVPQW SFQETKEFLA IRAELDQTFM ETKRNKLLWE VISTKMKEKG 60 FLRSADQCKC KWKNLVTRYK GCETIEPDSM RQQFPFYNEL QTIFAARMQR MLWLEAEGGG 120 ASSSMRKKAA GTRLSSDDED DNEESEEEKV SKKRRKGKGV AINTSTGSGD SNNLQHILEE 180 FMRQQMQMEV QWRERVELRE KERRMKEMEW RQKMEELEKE RLLMDRSWRE REEQRRMREE 240 VRAEKRDALI TALLNKLRRE DHHM

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	152	156	KKRRK
2	198	203	LREKER

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G01380.1	3e-64	Trihelix family protein