PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA02760.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

LBD

Protein Properties

Length: 191aa MW: 20930.9 Da PI: 7.7243

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA02760.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	127	9.1e-40	13	111	1	99
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallke 99 +CaaCk+l+rkC ++Cv+apyf a++ +kfa vhk+FGasnv+k+++++p e+reda++slvyeAear+rdPvyG++g + l++q+ ql+++la ++ OVA02760.1 13 SCAACKFLKRKCIPSCVFAPYFRADELQKFAKVHKVFGASNVSKIISEVPVEQREDAVKSLVYEAEARLRDPVYGCIGALALLHSQMLQLQHDLAISRA 111 6*********************************************************************************************98876 PP

Sequence ? help Back to Top
Protein Sequence Length: 191 aa Download sequence
MMKGQEYSRP TASCAACKFL KRKCIPSCVF APYFRADELQ KFAKVHKVFG ASNVSKIISE 60 VPVEQREDAV KSLVYEAEAR LRDPVYGCIG ALALLHSQML QLQHDLAISR ARLASLTSNP 120 SPPPPPSSSP PPPSPLIYNN YYVDGFIGLP SSDCVYEGMS SDQSSTSSCP NSFEWQLYGS 180 PYGPLPTSFP Q

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G11090.1	8e-54	LBD family protein