PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA02793.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

LBD

Protein Properties

Length: 176aa MW: 19772.5 Da PI: 7.65

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA02793.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	141.3	3.2e-44	6	105	1	100
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallke 99 +Ca+Ck+lrr+CakdCv+apyfp+++p+kfa+vhk+FGasnv+k+l++lp ++r da+sslv+eA+ar+rdPvyG+vg i+ lq+q++ql+ +la++++ OVA02793.1 6 PCASCKLLRRRCAKDCVFAPYFPSDDPHKFAIVHKVFGASNVSKMLQELPIHQRADAVSSLVFEANARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQA 104 7***********************************************************************************************998 PP DUF260 100 e 100 e OVA02793.1 105 E 105 7 PP

Sequence ? help Back to Top
Protein Sequence Length: 176 aa Download sequence
MGGNSPCASC KLLRRRCAKD CVFAPYFPSD DPHKFAIVHK VFGASNVSKM LQELPIHQRA 60 DAVSSLVFEA NARVRDPVYG CVGAISYLQN QVSQLQMQLA VAQAEILCIQ MQQEPALPTN 120 THHHHHHHLQ IDHHHSDEKS LLFQTSNLNN LPQYLNFASS ASNVIQDPLK RESLWT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G30130.1	9e-81	LBD family protein