PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OVA02827.1
Organism
Macleaya cordata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
Family BBR-BPC
Protein Properties Length: 284aa    MW: 30998.3 Da    PI: 10.2487
Description BBR-BPC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OVA02827.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GAGA_bind260.68.8e-805528471301
   GAGA_bind  71 nkalverdnkllalllvenslasalpvgvqvlsgtksidslqqlse......pqledsavelreeeklealpieeaaeeakekkkkkkrqrakkpkekk 163
                 n  + e + + ++++++ +  +++     + l+ tk+ ++  ++++        + +++ +++    +++ +  ++++++k+ +++k ++ +   k+ +
  OVA02827.1  55 NSMIPESETEQTSVEFAGHCWVHQ----RNFLPATKNSQNPMHTTHintetgLPVVPTSLGMPIDGSVQNGEFGNKTSKIKKPQSSK-KSDKVASKALR 148
                 444444555555555555544433....34555555555444444422122244445555555555555555554444444443333.34444455555 PP

   GAGA_bind 164 akkkkkksekskkkvkkesad.erskaekksidlvlngvslDestlPvPvCsCtGalrqCYkWGnGGWqSaCCtttiSvyPLPvstkrrgaRiagrKmS 261
                  k++kkk+++s   +kk++++ ++s +ekk++d+vl+g ++D s++P+PvCsCtG++rqCY+WG+GGWqS+CCtt++S yPLP+s+ r+gaR+agrKmS
  OVA02827.1 149 PKEPKKKPATS---TKKKGNSiSTSIREKKNLDIVLDGSTMDFSQVPAPVCSCTGVPRQCYRWGAGGWQSSCCTTNLSEYPLPMSSSRPGARLAGRKMS 244
                 56666655444...4444444478999************************************************************************ PP

   GAGA_bind 262 qgafkklLekLaaeGydlsnpvDLkdhWAkHGtnkfvtir 301
                 +ga+ klL++LaaeGy+ls++vDLkdhWAkHGtnkfvti+
  OVA02827.1 245 NGAYGKLLQRLAAEGYELSHAVDLKDHWAKHGTNKFVTIK 284
                 ***************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 284 aa     Download sequence    
MDEKGGMGIR NWDFSKQTVS VDAVLKPVSG IPVSGSTNEH HHAAFLKMGM YPNRNSMIPE  60
SETEQTSVEF AGHCWVHQRN FLPATKNSQN PMHTTHINTE TGLPVVPTSL GMPIDGSVQN  120
GEFGNKTSKI KKPQSSKKSD KVASKALRPK EPKKKPATST KKKGNSISTS IREKKNLDIV  180
LDGSTMDFSQ VPAPVCSCTG VPRQCYRWGA GGWQSSCCTT NLSEYPLPMS SSRPGARLAG  240
RKMSNGAYGK LLQRLAAEGY ELSHAVDLKD HWAKHGTNKF VTIK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35550.38e-63BBR-BPC family protein