PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA02910.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

MYB

Protein Properties

Length: 361aa MW: 40324 Da PI: 6.0773

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA02910.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	61.4	1.9e-19	15	62	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++l+d+++++G g+W++ ++ g++R++k+c++rw +yl OVA02910.1 15 KGPWTPEEDQKLIDYIQRHGHGSWRALPKLAGLNRCGKSCRLRWTNYL 62 79********************************************97 PP
2	Myb_DNA-binding	54.9	2.1e-17	68	113	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+++ eE++l++ ++ lG++ W+ Ia +++ gRt++++k++w+++l OVA02910.1 68 RGKFSDEEEQLIISLHSVLGNK-WSQIATHLP-GRTDNEIKNYWNTHL 113 89******************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 361 aa Download sequence
MMGRSPCCDE SGLKKGPWTP EEDQKLIDYI QRHGHGSWRA LPKLAGLNRC GKSCRLRWTN 60 YLRPDIKRGK FSDEEEQLII SLHSVLGNKW SQIATHLPGR TDNEIKNYWN THLKKKLLQM 120 GIDPITHRPR TDLNLLANLP HLLAAANICN LMNPWDNALR LQADAAQVAK VQLLNNLLQV 180 MSNGAQQNMD FVNHHLSSAP NRDNYLLNEY LEPNSQLGGL LSNGSSLSLG QLAPNPTQSG 240 FDFSNRGTQQ PNPADYQVAV VSDSCYHFEE GSSSKMVNNY INNHDNGMIN NINHLSTSVD 300 LIIPALVSAS PDSSTINQTE SKIKPTADIS TYSSTSTTFE AWGDLNLDDE NNDYNWTDLV 360 E

Sequence ? help Back to Top

Protein Sequence Length: 361 aa Download sequence

MMGRSPCCDE SGLKKGPWTP EEDQKLIDYI QRHGHGSWRA LPKLAGLNRC GKSCRLRWTN  60
YLRPDIKRGK FSDEEEQLII SLHSVLGNKW SQIATHLPGR TDNEIKNYWN THLKKKLLQM  120
GIDPITHRPR TDLNLLANLP HLLAAANICN LMNPWDNALR LQADAAQVAK VQLLNNLLQV  180
MSNGAQQNMD FVNHHLSSAP NRDNYLLNEY LEPNSQLGGL LSNGSSLSLG QLAPNPTQSG  240
FDFSNRGTQQ PNPADYQVAV VSDSCYHFEE GSSSKMVNNY INNHDNGMIN NINHLSTSVD  300
LIIPALVSAS PDSSTINQTE SKIKPTADIS TYSSTSTTFE AWGDLNLDDE NNDYNWTDLV  360
E

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G02940.1	2e-89	MYB family protein