PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OVA03220.1
Organism
Macleaya cordata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
Family M-type_MADS
Protein Properties Length: 192aa    MW: 21642.7 Da    PI: 7.7571
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OVA03220.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF22.71.3e-078322549
                HHHHHHHT-EEEEEEE-TTSEEEEE CS
      SRF-TF 25 eELSvLCdaevaviifsstgklyey 49
                +EL++LC+ae  vi+fs  gk y +
  OVA03220.1  8 SELCTLCAAETVVIVFSRAGKSYSF 32
                8********************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 192 aa     Download sequence    
MGLFGIKSEL CTLCAAETVV IVFSRAGKSY SFGHPSVDTI VDRYLLGGNY NSQNVDGIHP  60
HVKARIRDLN RQYTKALNEL EAEKKRGMEL KKVRRDSRNK HWWNKPIEEL GLQELELLKA  120
AMDELKDNVA DRANKLLIED SHFMPTADPI GTSSSTQHGY PFELNPNHLH TSVIPNHGYG  180
YGFVLDVLGL IK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24840.14e-28M-type_MADS family protein