PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA03249.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

MYB

Protein Properties

Length: 296aa MW: 34666.7 Da PI: 4.4125

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA03249.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	54.1	3.5e-17	9	56	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd+ll+++++++G g W+ ++ + g++R+ k+c++rw++yl OVA03249.1 9 KGSWTEEEDLLLKQCIEKYGEGKWRQVPPRAGLNRCSKSCRLRWLNYL 56 799*******************************************97 PP
2	Myb_DNA-binding	46.4	9.4e-15	62	107	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg + ++E +l+++ +k+lG++ W++Ia +++ gRt++++k++w+++l OVA03249.1 62 RGQFAADEIDLIIKMHKLLGNR-WALIAGRLP-GRTANDIKNYWNTHL 107 788999**************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 296 aa Download sequence
MEHRYGVRKG SWTEEEDLLL KQCIEKYGEG KWRQVPPRAG LNRCSKSCRL RWLNYLRPNI 60 KRGQFAADEI DLIIKMHKLL GNRWALIAGR LPGRTANDIK NYWNTHLNKK LMVSERSVVD 120 DQELKDKSNN SIHSEMETKV IKPQPLNFSK NSNKWFRGID HDTSMEAITI QQQSDTEIML 180 ISTDKNTTSS EPEQLNIRDE RMVWLERILL EREEEEEEEE DQEEEEEEEE EAEEKPEPMM 240 ISSCPISTDG SSHDHDDVKV DGAETTVVEA MNDLDDLLVD ENYYFWQLLL PAQLEN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G66370.1	6e-64	MYB family protein