PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA03270.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

DBB

Protein Properties

Length: 297aa MW: 32247.9 Da PI: 5.0312

Description

DBB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA03270.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	19.6	1.9e-06	4	47	5	42
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHkg......Htvvpl 42 C+ +e e++ C ++ lC C ++ H H++vpl OVA03270.1 4 QCNSCEAAEANVLCCADEAALCWACDVKVHAAnklaskHQRVPL 47 7****99*******************66899999999986 PP
2	zf-B_box	30.4	7.8e-10	52	94	1	37
zf-B_box 1 seerkCpeHeekelqlfCedCqqllCedClleeHkg......H 37 s+++kC+ ++e +fC +++ llC++C +++H H OVA03270.1 52 SQMPKCDICQEAIGYFFCLEDRALLCRKCDVSIHTAnsyvsgH 94 689******999******************544555556 PP

Sequence ? help Back to Top
Protein Sequence Length: 297 aa Download sequence
MKIQCNSCEA AEANVLCCAD EAALCWACDV KVHAANKLAS KHQRVPLSSS SSQMPKCDIC 60 QEAIGYFFCL EDRALLCRKC DVSIHTANSY VSGHQRFLLT GVKVGLEPTE PVGSSTKEKS 120 DFVEKTAEKE SQSVSRRGTS VSWNGENSEV LSHQLGGVGG LHASKMSFSG GTTSGSIPEW 180 PLDDFYGITD FNQSYGYMEN GSSKADSGKT GESGFSPTLQ ATDEDIDIDE CLGKVPEISW 240 MVPEIPSPPT ASGLFWPKSF RNSPDNQVFV PDVSFSYVQN PHCGQPNISS SKRQRQF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G78600.1	1e-100	DBB family protein