PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA03365.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

C2H2

Protein Properties

Length: 511aa MW: 55819.5 Da PI: 8.3802

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA03365.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	17.2	1.4e-05	6	28	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C+k F r nL+ H r H OVA03365.1 6 FVCEICNKGFQRDQNLQLHRRGH 28 89*******************88 PP
2	zf-C2H2	12.1	0.0006	82	104	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC +C+k + +s+ k H +t+ OVA03365.1 82 WKCDKCSKKYAVQSDWKAHSKTC 104 58*****************9998 PP

Sequence ? help Back to Top
Protein Sequence Length: 511 aa Download sequence
MATNRFVCEI CNKGFQRDQN LQLHRRGHNL PWKLKQRSST EIRKRVYICP EPTCVHHNPA 60 RALGDLTGIK KHFCRKHGEK KWKCDKCSKK YAVQSDWKAH SKTCGTREYK CDCGTIFSRR 120 DSFITHRAFC DALAEENNKV NQGLMATMEA GKLQGQVVEL MSSMPVNNTS PGGEFSETDA 180 KNPLKSLPQD LMVMPLKPLT MTGGMFSSSS GTLFNGPRSN ISSASSCLQL SANSLSNFDG 240 LDDGKIGRQL AGSAHMSATA LLQKAAQMGA TASSNINSPM MQKSFVSGMA GLDQFNGIRS 300 SSPYGGINQQ DNNNNNNNNS SLDYMQSQTD QSQVDGMINN GGGFINQFLH KGLSSQEMSS 360 QFIDPTTPGT TDSSSSGMNN MAMFTGLFMG GDQQHGFLKN MEQHDHQNSS STTASMSSPG 420 RTTVNSSGLG IAGCGRSPIG LSRFGENNNG DMMTVDFLGV GGISRSANLN EQQQQQQRMD 480 QLEAISQQRL HSFQVQELLN SQAMDKPMWD V

Sequence ? help Back to Top

Protein Sequence Length: 511 aa Download sequence

MATNRFVCEI CNKGFQRDQN LQLHRRGHNL PWKLKQRSST EIRKRVYICP EPTCVHHNPA  60
RALGDLTGIK KHFCRKHGEK KWKCDKCSKK YAVQSDWKAH SKTCGTREYK CDCGTIFSRR  120
DSFITHRAFC DALAEENNKV NQGLMATMEA GKLQGQVVEL MSSMPVNNTS PGGEFSETDA  180
KNPLKSLPQD LMVMPLKPLT MTGGMFSSSS GTLFNGPRSN ISSASSCLQL SANSLSNFDG  240
LDDGKIGRQL AGSAHMSATA LLQKAAQMGA TASSNINSPM MQKSFVSGMA GLDQFNGIRS  300
SSPYGGINQQ DNNNNNNNNS SLDYMQSQTD QSQVDGMINN GGGFINQFLH KGLSSQEMSS  360
QFIDPTTPGT TDSSSSGMNN MAMFTGLFMG GDQQHGFLKN MEQHDHQNSS STTASMSSPG  420
RTTVNSSGLG IAGCGRSPIG LSRFGENNNG DMMTVDFLGV GGISRSANLN EQQQQQQRMD  480
QLEAISQQRL HSFQVQELLN SQAMDKPMWD V

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G44160.1	9e-85	C2H2 family protein