PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA03405.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

WRKY

Protein Properties

Length: 637aa MW: 69459.9 Da PI: 5.6854

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA03405.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	96.9	1.4e-30	351	409	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 Dg++WrKYGqK+ kg+++pr+YYrCt+a gCpv+k+v+r+aed +v+++tYeg+Hnh+ OVA03405.1 351 TDGCQWRKYGQKMAKGNPCPRAYYRCTMAaGCPVRKQVQRCAEDRSVLITTYEGNHNHP 409 7*************************99**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 637 aa Download sequence
MGRGGGLTID SEPIIGFFLG KPTPINSSFL ISNNNNLIKR NKHHDFIMDS SNATNRLSPA 60 IEFSMNINSR DDQIALQPSD EKRVVVDEMD FFSDKTRLQD LNRNKTSSSI DVKKEDLNGG 120 GAAPRRFDMD VNTGLNLLTA NTGSDQSMVD DGISPNAEDK RAKSELIVLQ AELDRMNTEN 180 SKLREMLNQV NNNYNALQMH LVTLMQQQNP KMESTQEHEM EVVKLEEKKH EVVPRQFMDL 240 GLAATAETDE LTQSSSDSGS PQNNLEVVSN EYRSQKNAGS NNEIIPFDQD KSEYSRGIGK 300 EESSDQASQG WVPSKVPKMN APKTEDQTTT EATMRKARVS VRARSEAPMI TDGCQWRKYG 360 QKMAKGNPCP RAYYRCTMAA GCPVRKQVQR CAEDRSVLIT TYEGNHNHPL PPAAMAMAST 420 TSAAACMLLS GSMPSADGLM NSNFMARTML PCSSSMATIS ASAPFPTVTL DLTHSPNNPL 480 QFQRSPTQFH VPFPNPSQNF ASPQAPLVQQ VFGQSLYNQS KFSGLQVSSQ DMETGQFGNQ 540 SQLPAQQLQT QNNPSLADTV SAATAAITAD PNFTAALAAA ITSIIGGGNH QTNNNNNNNN 600 NATDANTTTN TSTSNSNNNS NNNNNPNKLS TSSFQGT

Sequence ? help Back to Top

Protein Sequence Length: 637 aa Download sequence

MGRGGGLTID SEPIIGFFLG KPTPINSSFL ISNNNNLIKR NKHHDFIMDS SNATNRLSPA  60
IEFSMNINSR DDQIALQPSD EKRVVVDEMD FFSDKTRLQD LNRNKTSSSI DVKKEDLNGG  120
GAAPRRFDMD VNTGLNLLTA NTGSDQSMVD DGISPNAEDK RAKSELIVLQ AELDRMNTEN  180
SKLREMLNQV NNNYNALQMH LVTLMQQQNP KMESTQEHEM EVVKLEEKKH EVVPRQFMDL  240
GLAATAETDE LTQSSSDSGS PQNNLEVVSN EYRSQKNAGS NNEIIPFDQD KSEYSRGIGK  300
EESSDQASQG WVPSKVPKMN APKTEDQTTT EATMRKARVS VRARSEAPMI TDGCQWRKYG  360
QKMAKGNPCP RAYYRCTMAA GCPVRKQVQR CAEDRSVLIT TYEGNHNHPL PPAAMAMAST  420
TSAAACMLLS GSMPSADGLM NSNFMARTML PCSSSMATIS ASAPFPTVTL DLTHSPNNPL  480
QFQRSPTQFH VPFPNPSQNF ASPQAPLVQQ VFGQSLYNQS KFSGLQVSSQ DMETGQFGNQ  540
SQLPAQQLQT QNNPSLADTV SAATAAITAD PNFTAALAAA ITSIIGGGNH QTNNNNNNNN  600
NATDANTTTN TSTSNSNNNS NNNNNPNKLS TSSFQGT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G04450.1	1e-125	WRKY family protein