PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA03754.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

C2H2

Protein Properties

Length: 443aa MW: 48259.8 Da PI: 9.4279

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA03754.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	17.1	1.5e-05	214	236	2	23
EETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 2 kCpdCgksFsrksnLkrHirt.H 23 +CpdCg++F ++L+ H+++ H OVA03754.1 214 SCPDCGEVFMKTEDLELHQSVrH 236 8******************9988 PP

Sequence ? help Back to Top
Protein Sequence Length: 443 aa Download sequence
MAETRNPRKP TKKKHQNQNH PPSKTEKPPP PPPLPSPLPL PSPPPPSWVV MKSIFSCKHL 60 QTKEQQQKPE ELKEGKNKRC KKMVCSGSLC SNTRVMHRPE TLSPEDSKKW GSSSSSSMGG 120 SNGSTSRRSS KSPLNENNNG VVSSSTTTTT TTTTTSSSTS SSSSSTLSSS RSSAAGSFRG 180 MHLRRLSGCY ECRMVVDPSL LVSRDPSLRN TLCSCPDCGE VFMKTEDLEL HQSVRHAVSE 240 LGPEDSSRNI VEIIFQSSWL KKQAPICKIE RILKVHNSQK TITRFEDYRE SIKAKANKLM 300 KKHPRCVADG NELLRFHCTT FVCSIGVNGS SNLCNSIPQC NVCSIIKNGF KIEGITGGGG 360 ICTTATSGKA HDNAEITTEN EKRAMLVCRV IAGRVKRNQD GGTEEFDSVA GPTGIYSDLD 420 ELSVFNSKAI LPCFVVIYGG FNG

Sequence ? help Back to Top

Protein Sequence Length: 443 aa Download sequence

MAETRNPRKP TKKKHQNQNH PPSKTEKPPP PPPLPSPLPL PSPPPPSWVV MKSIFSCKHL  60
QTKEQQQKPE ELKEGKNKRC KKMVCSGSLC SNTRVMHRPE TLSPEDSKKW GSSSSSSMGG  120
SNGSTSRRSS KSPLNENNNG VVSSSTTTTT TTTTTSSSTS SSSSSTLSSS RSSAAGSFRG  180
MHLRRLSGCY ECRMVVDPSL LVSRDPSLRN TLCSCPDCGE VFMKTEDLEL HQSVRHAVSE  240
LGPEDSSRNI VEIIFQSSWL KKQAPICKIE RILKVHNSQK TITRFEDYRE SIKAKANKLM  300
KKHPRCVADG NELLRFHCTT FVCSIGVNGS SNLCNSIPQC NVCSIIKNGF KIEGITGGGG  360
ICTTATSGKA HDNAEITTEN EKRAMLVCRV IAGRVKRNQD GGTEEFDSVA GPTGIYSDLD  420
ELSVFNSKAI LPCFVVIYGG FNG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G75710.1	2e-95	C2H2 family protein