PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA03906.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

NAC

Protein Properties

Length: 416aa MW: 47705.4 Da PI: 7.0948

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA03906.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	183.6	4.9e-57	17	143	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgel 99 lppGfrFhPtdee++++yL++kv + k+++ ++i evd++k+ePwdLpk++k +ekewyfF++rd+ky+tg r+nrat++gyWkatgkdke+++ kg l OVA03906.1 17 LPPGFRFHPTDEEIITHYLTRKVLNIKFTA-TAIGEVDLNKSEPWDLPKQAKMGEKEWYFFCQRDRKYPTGMRTNRATEAGYWKATGKDKEIYKGKGCL 114 79***********************999.88***********99999*************************************9 PP NAM 100 vglkktLvfykgrapkgektdWvmheyrl 128 vg+kktLvfy+grapkgekt+Wvmheyrl OVA03906.1 115 VGMKKTLVFYRGRAPKGEKTNWVMHEYRL 143 *************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 416 aa Download sequence
MEEVPVLINK AEDSIDLPPG FRFHPTDEEI ITHYLTRKVL NIKFTATAIG EVDLNKSEPW 60 DLPKQAKMGE KEWYFFCQRD RKYPTGMRTN RATEAGYWKA TGKDKEIYKG KGCLVGMKKT 120 LVFYRGRAPK GEKTNWVMHE YRLDGKFSYY NLPKTAKDEW VVCRVFHKNN GVKKSPYSGL 180 LRMNSIGDDL LMINSPSLPP LMDPPNFNSN RPGSSYLINT DVDEFKTTKS GRFMDGNQPP 240 YISTGMDDHR HHHHQQQDNK SFILSNYNYN MNQQSSNTTP QNSSIFYPQI PLTNMGGYLH 300 QERSTTNVNA IPSFPTTNFT SGPDQAILRA LADQTHDQRY DLKRQCKMEQ FTSNQSMISH 360 SQDTGLSTDM NTTEISSSMV SKHDMGNNSC YEDLDHHGPS SDDTHLVDLD CLWNYL

Sequence ? help Back to Top

Protein Sequence Length: 416 aa Download sequence

MEEVPVLINK AEDSIDLPPG FRFHPTDEEI ITHYLTRKVL NIKFTATAIG EVDLNKSEPW  60
DLPKQAKMGE KEWYFFCQRD RKYPTGMRTN RATEAGYWKA TGKDKEIYKG KGCLVGMKKT  120
LVFYRGRAPK GEKTNWVMHE YRLDGKFSYY NLPKTAKDEW VVCRVFHKNN GVKKSPYSGL  180
LRMNSIGDDL LMINSPSLPP LMDPPNFNSN RPGSSYLINT DVDEFKTTKS GRFMDGNQPP  240
YISTGMDDHR HHHHQQQDNK SFILSNYNYN MNQQSSNTTP QNSSIFYPQI PLTNMGGYLH  300
QERSTTNVNA IPSFPTTNFT SGPDQAILRA LADQTHDQRY DLKRQCKMEQ FTSNQSMISH  360
SQDTGLSTDM NTTEISSSMV SKHDMGNNSC YEDLDHHGPS SDDTHLVDLD CLWNYL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G18270.1	1e-112	NAC family protein