PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA03922.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

MYB

Protein Properties

Length: 404aa MW: 45372.7 Da PI: 7.2846

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA03922.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	52.6	1e-16	133	178	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg W + Ed +l+++v q+G+ +W++Ia+++ gR++k+c++rw++ OVA03922.1 133 RGHWRPAEDAKLKELVSQYGPQNWNLIAEKLE-GRSGKSCRLRWFNQ 178 899***************************.*********996 PP
2	Myb_DNA-binding	56	9.3e-18	185	228	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 r ++++eE+e+l+ a++++G++ W+ Iar ++ gRt++ +k++w+ OVA03922.1 185 RRAFSEEEEERLLAAHRLYGNK-WAMIARLFP-GRTDNAVKNHWHV 228 678*****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 404 aa Download sequence
MSLQQLQSSS VSQKIDNEGC FRGFAGVNFL PPPPPFPPSF GVLDPPKKRL CLKAEMGFQV 60 LSPQLEQEKR DWSFQISEGN RGRNGIDSGD EGFSGDEKNV MCMMKQSGEE EEGESFTAEK 120 EHESGQSNKL CARGHWRPAE DAKLKELVSQ YGPQNWNLIA EKLEGRSGKS CRLRWFNQLD 180 PRINRRAFSE EEEERLLAAH RLYGNKWAMI ARLFPGRTDN AVKNHWHVIM ARKHREQSSV 240 YRRRKPTSSS SQAPKGMEMT HKNNACSEST ITSTIDESAS TCTDLSLNSS SSRVHPGSFT 300 RISPQQHHQL YDQLQMGSSE EKMVSFKSEC FKKFDGSGNG FYQPGHMMMV MGGDQTGYSE 360 SNSDVSGAES VANNKKNLYK DREIDNGVEK ICLPFIDFLG VGAT

Sequence ? help Back to Top

Protein Sequence Length: 404 aa Download sequence

MSLQQLQSSS VSQKIDNEGC FRGFAGVNFL PPPPPFPPSF GVLDPPKKRL CLKAEMGFQV  60
LSPQLEQEKR DWSFQISEGN RGRNGIDSGD EGFSGDEKNV MCMMKQSGEE EEGESFTAEK  120
EHESGQSNKL CARGHWRPAE DAKLKELVSQ YGPQNWNLIA EKLEGRSGKS CRLRWFNQLD  180
PRINRRAFSE EEEERLLAAH RLYGNKWAMI ARLFPGRTDN AVKNHWHVIM ARKHREQSSV  240
YRRRKPTSSS SQAPKGMEMT HKNNACSEST ITSTIDESAS TCTDLSLNSS SSRVHPGSFT  300
RISPQQHHQL YDQLQMGSSE EKMVSFKSEC FKKFDGSGNG FYQPGHMMMV MGGDQTGYSE  360
SNSDVSGAES VANNKKNLYK DREIDNGVEK ICLPFIDFLG VGAT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G26780.1	3e-69	MYB family protein