PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OVA03994.1
Organism
Macleaya cordata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
Family LBD
Protein Properties Length: 270aa    MW: 30928.8 Da    PI: 6.9534
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OVA03994.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260112.52.8e-35401401100
      DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkal.peeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallk 98 
                 aCaaCk++r+kC++dC lapyfp +++ +f n+hklFG+sn+lk++++l ++ e+++am++++ +Ae ra+dPv G++++i +lq++++ ++aela + 
  OVA03994.1  40 ACAACKYQRKKCSSDCLLAPYFPPTHQTQFLNAHKLFGVSNLLKIIRSLnDPIEKQEAMRTMIIQAEYRANDPVGGCYRLICDLQRKIKLHEAELAFVL 138
                 7************************************************67778*****************************************9887 PP

      DUF260  99 ee 100
                 ++
  OVA03994.1 139 NQ 140
                 66 PP
Sequence ? help Back to Top
Protein Sequence    Length: 270 aa     Download sequence    
MQPRNPITPN TNQTSLNNTN MSTQRGPTKI GATSSHTSSA CAACKYQRKK CSSDCLLAPY  60
FPPTHQTQFL NAHKLFGVSN LLKIIRSLND PIEKQEAMRT MIIQAEYRAN DPVGGCYRLI  120
CDLQRKIKLH EAELAFVLNQ LALYRAQGVV GEQHHHEIIM NHQNILRVPP LNVYSNHINH  180
QHLIQQVHDN QDDDQQQQEY YNMIQDNNQL VLHHDDEVAL NQLWTMETFG NNHDGGVNMM  240
KPSSSSTMVD HKLLQQQQQQ AESFVDQEVR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G13850.14e-37LBD family protein