PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OVA04014.1
Organism
Macleaya cordata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
Family MIKC_MADS
Protein Properties Length: 251aa    MW: 28793 Da    PI: 8.9501
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OVA04014.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF93.87.9e-30959151
                S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
      SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                krien + rqvtfskRr+g+lKKA+ELSvLCdaeva+iifsstgkl+e+ss
  OVA04014.1  9 KRIENATSRQVTFSKRRAGLLKKAQELSVLCDAEVALIIFSSTGKLFEFSS 59
                79***********************************************96 PP
2K-box67.64.2e-23811729100
       K-box   9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100
                 +e  ++ + ++e++ Lk+ei++L+  + ++lG++L+ Ls keLq+Le+qL++++  ++++K++ll+eq+e+++ +e+++  en++Lrk++ee
  OVA04014.1  81 VEYDTERQQSKEINILKDEISKLRMAHLRMLGKELKGLSPKELQHLENQLNEGILLVKARKEQLLFEQLEQSRLQEQRALLENETLRKQVEE 172
                 44555667789******************************************************************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 251 aa     Download sequence    
MGRGKIEIKR IENATSRQVT FSKRRAGLLK KAQELSVLCD AEVALIIFSS TGKLFEFSSS  60
GMKRTLSRYK KCQDCSESSL VEYDTERQQS KEINILKDEI SKLRMAHLRM LGKELKGLSP  120
KELQHLENQL NEGILLVKAR KEQLLFEQLE QSRLQEQRAL LENETLRKQV EELRALIPST  180
ERVMPPYLEF HPMDRKHHIK HDIISSNVVC NCVSERRGDS DTSLHLGLAS SDVYYKMKAP  240
ERASSSNDSD T
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13790.13e-67MIKC_MADS family protein