PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA04100.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

HB-PHD

Protein Properties

Length: 1184aa MW: 131027 Da PI: 4.8043

Description

HB-PHD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA04100.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	37.2	4.9e-12	958	1002	12	56
HHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 12 leeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 +++L e ++n yp++e++e+LA++lg+t rqV+ WF N R + OVA04100.1 958 TQRLFESLKENEYPTRETKEKLAEELGITVRQVSKWFENARWSLR 1002 5666666679******************************97665 PP
2	PHD	38.8	2.1e-13	579	634	1	51
SBTTTSS..TCTTSSEEEBSS.SSSEEETTTSTSSSSHHSHHSS..TBSSHHHHTT CS PHD 1 rCkvCgk..sdeegelvlCdg.CkewfHlkClglkleseekpeg..ewlCeeCkek 51 +C+ C++ ++++++lCdg C++ fH+ Cl+++l +ee+p+g wlC+ C++k OVA04100.1 579 FCAKCRSkdVSADNDIILCDGiCNRGFHQMCLDPPLLKEEIPQGdeGWLCPGCDCK 634 6999976667****88*******************9*****985 PP

Sequence ? help Back to Top
Protein Sequence Length: 1184 aa Download sequence
MDVTSPRLEN SPTKKSSSPK ENSVEQKDEC GFGDVQSESM GVASTRQENS LMTKSPTPKQ 60 NILEQKHESG FGDVQSEALD ATSPRQGNSL TTKSPSPKLN ILEEKYESGF GDVQGEVMDV 120 ASPRQENSLI TKSTSPKLNF LEQKHESGFG DVQNEAMDVA PVTQENSLTT KSPSPKLNIL 180 EQKYESGFGD VQAEAMGVAS PRQENSLITM SSSPKLTILE QKHESGIGDV QSEAMDVAPV 240 TQENSLTMKS PSPKLDILEQ KYESDFGDVQ GEAMDVTSPR QENSLITKSL SPKLNILEQR 300 NESGTEDVQS EAMDVTPVTQ ENSPTMKSSS PKQYILEQKH ESGFGDVQCA AAVVTSLTQE 360 NSRTTKNSSP KQNIPKQKLE SGSEDVQNEA LETRNAGRDF VDVELLETPE NTSKNSNRSA 420 RKKNRFSSKS KKKNYMLRSS LGSTRVLRSR LRGTSKAPDP SSISVNVNTE RDGKRNKRKK 480 TRKTLNDEFA TTRKRVKYLL NRTRYEHSLI EAYSGEGWKG QSAEKIRPEK ELQRATSEIL 540 RCKRKIRDLF QHLDSLCAEG RFQESLFDSE GQIYSEDIFC AKCRSKDVSA DNDIILCDGI 600 CNRGFHQMCL DPPLLKEEIP QGDEGWLCPG CDCKVDCIDL LNDYFGTDLS INDNWEKVFP 660 EVATTAAGNK LEDNFGFPSD DSEDNDYDPD NPEVDEKVEA EGSSSESSDE SDFTSASDDS 720 ENLPHEEQNL GLPSDDSEDD DYDPNAPDLD EHIKEESSSS DFTSDSGDSG PLSDGNGTLG 780 TDEIPMPSSV DGANPLTASG NRKSTEADRK KQRVNSELLS ILEQGNASPV SGRRHREQLD 840 YKKLHDETYG NVPSDSSDDE DWMDADGQGK RKKDTGGKES VLSSKGNCRA TRSGANTRKT 900 KRILKSTEND QKRKTRQKLN FGGANNTASD AQKEVLDPDC VEKRAKTSAS RSLGQAVTQR 960 LFESLKENEY PTRETKEKLA EELGITVRQV SKWFENARWS LRHSGNRTAT ASPKNANKLN 1020 QTNGKTLEPE TKILPSDGGS KRVHGRELGE TDNVEAVAME RMAEESTPQK SRSPKLRNRR 1080 NSNVGGKKEV AGTEETPIIT VIKHPFSSIE GLLLQRGSPE LHWHSLVDSL FYRYHASLMG 1140 PPSVAELQPP FFLFPFFPLF WEDSGIDASA GLDLILFSTL SEVS

Sequence ? help Back to Top

Protein Sequence Length: 1184 aa Download sequence

MDVTSPRLEN SPTKKSSSPK ENSVEQKDEC GFGDVQSESM GVASTRQENS LMTKSPTPKQ  60
NILEQKHESG FGDVQSEALD ATSPRQGNSL TTKSPSPKLN ILEEKYESGF GDVQGEVMDV  120
ASPRQENSLI TKSTSPKLNF LEQKHESGFG DVQNEAMDVA PVTQENSLTT KSPSPKLNIL  180
EQKYESGFGD VQAEAMGVAS PRQENSLITM SSSPKLTILE QKHESGIGDV QSEAMDVAPV  240
TQENSLTMKS PSPKLDILEQ KYESDFGDVQ GEAMDVTSPR QENSLITKSL SPKLNILEQR  300
NESGTEDVQS EAMDVTPVTQ ENSPTMKSSS PKQYILEQKH ESGFGDVQCA AAVVTSLTQE  360
NSRTTKNSSP KQNIPKQKLE SGSEDVQNEA LETRNAGRDF VDVELLETPE NTSKNSNRSA  420
RKKNRFSSKS KKKNYMLRSS LGSTRVLRSR LRGTSKAPDP SSISVNVNTE RDGKRNKRKK  480
TRKTLNDEFA TTRKRVKYLL NRTRYEHSLI EAYSGEGWKG QSAEKIRPEK ELQRATSEIL  540
RCKRKIRDLF QHLDSLCAEG RFQESLFDSE GQIYSEDIFC AKCRSKDVSA DNDIILCDGI  600
CNRGFHQMCL DPPLLKEEIP QGDEGWLCPG CDCKVDCIDL LNDYFGTDLS INDNWEKVFP  660
EVATTAAGNK LEDNFGFPSD DSEDNDYDPD NPEVDEKVEA EGSSSESSDE SDFTSASDDS  720
ENLPHEEQNL GLPSDDSEDD DYDPNAPDLD EHIKEESSSS DFTSDSGDSG PLSDGNGTLG  780
TDEIPMPSSV DGANPLTASG NRKSTEADRK KQRVNSELLS ILEQGNASPV SGRRHREQLD  840
YKKLHDETYG NVPSDSSDDE DWMDADGQGK RKKDTGGKES VLSSKGNCRA TRSGANTRKT  900
KRILKSTEND QKRKTRQKLN FGGANNTASD AQKEVLDPDC VEKRAKTSAS RSLGQAVTQR  960
LFESLKENEY PTRETKEKLA EELGITVRQV SKWFENARWS LRHSGNRTAT ASPKNANKLN  1020
QTNGKTLEPE TKILPSDGGS KRVHGRELGE TDNVEAVAME RMAEESTPQK SRSPKLRNRR  1080
NSNVGGKKEV AGTEETPIIT VIKHPFSSIE GLLLQRGSPE LHWHSLVDSL FYRYHASLMG  1140
PPSVAELQPP FFLFPFFPLF WEDSGIDASA GLDLILFSTL SEVS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	477	497	KRKKTRKTLNDEFATTRKRVK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G19510.1	8e-87	HB-PHD family protein