PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OVA04176.1
Organism
Macleaya cordata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
Family bHLH
Protein Properties Length: 370aa    MW: 41325.4 Da    PI: 6.1929
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OVA04176.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH38.42.2e-12194239555
                 HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 h ++Er+RR+++ ++f  L  ++P +     kK++Ka++L  A++Y+k+Lq
  OVA04176.1 194 HIMAERKRREKLSQRFIALSAIVPGL-----KKMDKASVLGDAIKYLKQLQ 239
                 899***********************.....9******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 370 aa     Download sequence    
METSSIRWLS ELALMEDPNF IHQSEMNSFD DEFADQNIAA ALVGNFQHYS FTSADSYSSY  60
PPFSTTTTTT TTTSSLEASE TQTGIDKPAK QLETESWNSS TTTTENLSTP PEASSYSPPK  120
ILSFGNSNSP AYPHDHQHLY GNNNLIVPLK PKEEYLVSSG NMNLMNQNYI VKAGQQGTKR  180
PNSATKPPSH AYDHIMAERK RREKLSQRFI ALSAIVPGLK KMDKASVLGD AIKYLKQLQE  240
KVKTLEEQTA KKTVESVVFV NKKSRLSTDD DSSSSDESFA NQSNETLPEI EAKVSDKNVL  300
IRIHCEKRNG ILVKTLAEVE KFHLTVVNSN VMVFGDSALN ITVHAKMDVE FCMETKDLVR  360
NLRSAFLQFM
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1198203ERKRRE
2199204RKRREK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37850.16e-58bHLH family protein